Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00152 ATGTTAGCGATATCTCCTCCTATGTTTTCAACAATTGGATGGCCCTTTGAGGAGCCTTTAAGCCATAACCAGCATCAGAATCACTTCCACACAGACAATAATGATCAATTATTTAATTTTGATGATCAAGTTGAGGCCGAAATTAATTCAACTGATCCCTCACAATGCACAAGCAACGACCTTAGCATGGTCAAGAAGCTTGTTCATAATGCTAGTGAACGTGATCGCCGAAAGAAGATCAATAATTTGTATTCTTCACTTCGATCACTTCTTCCTATTTCTGATCAAATGAAGAAGTTGAGTATTCCAGCAACAATTTCAAGAGTCCTAAAATACATACCAGAAATACAGAAACATGTGGAAGGACTAATTAAGAGAAAACAAGAGATCTTATTGAGACTTTCTCCACAAGTAAATGAAGTTATTATAAGCAAACAATCTCAAAAAAAGAAACATAGTTACAACTCTAGTTTTGTAGTTTCATCAAGTAGACTAAATGATAGTGAAGTTGCTATTCAGATTTCATGTTACACTGTCCACAAGATTCCACTTTCTGAGATTTTGCTATGTTTAGAAAATGATGGTCTTTTGTTGCTAAATGTTTCTTCATCTCAAACCTTTGGAGGGAGGGTCTTCTACAATTTGCATTTTCAGGTGGATAAAACACAAAGATTAGAATCCGATATTTTAAACGAGAAGCTGTTATCAATAATGGAAAAGGAAGGAGGGTTTTCAATACGATAA 744 0.3468 MLAISPPMFSTIGWPFEEPLSHNQHQNHFHTDNNDQLFNFDDQVEAEINSTDPSQCTSNDLSMVKKLVHNASERDRRKKINNLYSSLRSLLPISDQMKKLSIPATISRVLKYIPEIQKHVEGLIKRKQEILLRLSPQVNEVIISKQSQKKKHSYNSSFVVSSSRLNDSEVAIQISCYTVHKIPLSEILLCLENDGLLLLNVSSSQTFGGRVFYNLHFQVDKTQRLESDILNEKLLSIMEKEGGFSIR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00152 247 CDD bHLH_AtORG2_like 65 140 - -
Mepo4g00152 247 Gene3D - 56 153 IPR036638 GO:0046983
Mepo4g00152 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 134 IPR036638 GO:0046983
Mepo4g00152 247 SMART finulus 70 122 IPR011598 GO:0046983
Mepo4g00152 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 64 116 IPR011598 GO:0046983
Mepo4g00152 247 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 55 236 - -
Mepo4g00152 247 FunFam Transcription factor ORG2 60 155 - -
Mepo4g00152 247 Pfam Helix-loop-helix DNA-binding domain 65 117 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00152 Mepo-Chr4 2802580 2803630 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00152 1 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 41.923 1.63e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g00152 HLH 5.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00152 - - vvi:100262373 255.373