Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00139 ATGAAGATGCAAAGTTCAAAATCTTTTGGGAGAAAGCGTGAAGAATGGTCATATACTGAGAACCTTTCATCTTCGGACAAGATAAGTAGTGACACTGTTTTGAAACGGAGAAAGGTGAATAAAGCATTAACAATTTTTAGGGACTTATCACACAAACTCTATTGTGAATACAAGACAAACCAACCTGTAAAATTGAAAGCAAAATTAAGGGCTTTGGCTGAAGCTACGAGGTTTATGAAAGCGAAACGTCAATGGGAAAACACCGGAAAGAGATTAGGGCATGTAGATGGAATTGAAGTTGGTGACCAATTTCAGTATAGGGCTGAACTTATTGCCATCGGTCTCCATCAACAACACTCTTGTGGTATTGATTATTTGGGTAAAGGGGAGGGTTCTTTGGCAACCAGCATTGTTGTAACTCATAGATATGCTAATGTTATGAAGTCTTCTGGTTGTTTGCTTTATGAAGGTCATGGTGGTAACCCTAATATAAGGGATGGCGTTGCACCTCATGATCAGAAATTGGCGCGTGGAAATCTTGCTTTGTGGAATAGTATGAATGTTGGGAGTCCTGTTAGGGTTATATTGCAGGTTTCTGAAAAATCTGAAGTGATGGAAGAGTTGAGCAACAATGTTTCTTATTCATACATATATGATGGGTTGTATTCGGTGAACAATGTGACTCGAGTAAGAGGACAATTTGGAAAACTTGTTTTCAGGTTTGTGCTTAAGAAAATTACGGACCAACCTGCTAGTGTTTCCCCTCGAGATGTTGTAATGGGAACTTTCCAGAAGAGACACAATTCTGAAGGTCATGTTCTTCCAAAGAATGTTTTCCCTCGAGATGTTGTTATGGAAACCAAAACTTTCCGAAAGAGACAAAAGCCTAAAGGTTTTATTCTCTCCAAGGAAGTTGTTCGAATCAATGATATTTCGGAGGGCAAAGAAAAATTTCCTATTCGGGTGGTGACACCTATAAGCTCCGTGGAGATACCTAAACCCTGCGGTTACCTAGTCAATATAACTTATCCAAAGATGAATCGTTCATTACCAGGTGGTGGATGTAATTGTGCGAATGCGTGTGTTGATTGTCTTGAATGTGTTTGTATAGCTAAGAATGGTGGGACATTAGCCTATGATGGTAACAGAAAACTTGTTTTCCCTATGAAATCATCCTTTATATATGAGTGTGGCCCTTCTTGCTTGTGTTTGTCGTCTTGCATCAACCGAGTGAGTCAATCCGGTATTCAGTTCCAACTTGAAATCTTCAAAACAAAATTGAAGGGGTGGGGTGTTCGAACACGCTCTTTCATTCCATCTGGAAGCTTTGTGTGTGAGCTCATTGGAGAAGTTGTTCATCTCAACAACCAAAAAGTTGGATCAAATCTACATGTTGATGACTATATAATTAATATAGGTGTTTCTGGCAAGTGCTTCATTGATGCAACTAGACATGGAAACATGGGAAGGTTTATAAATCATAGTTGTTCTCCTAACCTATGTGTGAAAGATGTTATGTATGATCACAATGATAAGAGTTTACCCCACAAAATGTTGTTTGCTACAAAGGACATACCCGCAGGTAGAGAGCTGAGTTATGATTACAATTGCTGTAAGGTGAATATCAGGGTTTTGAGTAAAATTTGCTACTGTGGTTCATTGGAATGCAATGGACAAATTTACATTTGA 1689 0.3878 MKMQSSKSFGRKREEWSYTENLSSSDKISSDTVLKRRKVNKALTIFRDLSHKLYCEYKTNQPVKLKAKLRALAEATRFMKAKRQWENTGKRLGHVDGIEVGDQFQYRAELIAIGLHQQHSCGIDYLGKGEGSLATSIVVTHRYANVMKSSGCLLYEGHGGNPNIRDGVAPHDQKLARGNLALWNSMNVGSPVRVILQVSEKSEVMEELSNNVSYSYIYDGLYSVNNVTRVRGQFGKLVFRFVLKKITDQPASVSPRDVVMGTFQKRHNSEGHVLPKNVFPRDVVMETKTFRKRQKPKGFILSKEVVRINDISEGKEKFPIRVVTPISSVEIPKPCGYLVNITYPKMNRSLPGGGCNCANACVDCLECVCIAKNGGTLAYDGNRKLVFPMKSSFIYECGPSCLCLSSCINRVSQSGIQFQLEIFKTKLKGWGVRTRSFIPSGSFVCELIGEVVHLNNQKVGSNLHVDDYIINIGVSGKCFIDATRHGNMGRFINHSCSPNLCVKDVMYDHNDKSLPHKMLFATKDIPAGRELSYDYNCCKVNIRVLSKICYCGSLECNGQIYI 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00139 562 Gene3D SET domain 284 543 IPR046341 -
Mepo4g00139 562 Pfam SET domain 429 536 IPR001214 GO:0005515
Mepo4g00139 562 ProSiteProfiles SET domain profile. 418 536 IPR001214 GO:0005515
Mepo4g00139 562 SMART set_7 418 542 IPR001214 GO:0005515
Mepo4g00139 562 SUPERFAMILY SET domain 295 551 IPR046341 -
Mepo4g00139 562 SUPERFAMILY PUA domain-like 75 252 IPR015947 -
Mepo4g00139 562 ProSiteProfiles YDG domain profile. 93 245 IPR003105 -
Mepo4g00139 562 SMART G9a_1 88 249 IPR003105 -
Mepo4g00139 562 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 24 553 - -
Mepo4g00139 562 ProSiteProfiles Pre-SET domain profile. 353 415 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo4g00139 562 SMART preset_2 308 402 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo4g00139 562 ProSiteProfiles Post-SET domain profile. 545 561 IPR003616 -
Mepo4g00139 562 Pfam Pre-SET motif 311 410 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo4g00139 562 Gene3D - 75 260 IPR036987 -
Mepo4g00139 562 Pfam SAD/SRA domain 92 249 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00139 Mepo-Chr4 2617709 2619492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00139 87 560 Su(var)3-9 homologs AT5G04940 33.268 7.40e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo4g00139 SAD_SRA 2.5e-36 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00139 - K11420 gmx:100807574 593.964