Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00118 ATGGCGAAGGGTGACGATTCAGTACTGAAAAAACATAACAAAAAGCTCAGGAAAAAACAAAACAGCAAGAATTCCGTCTCTGCTAAGATTGCCGCTGTTATCGCCGCCAAGAAGCGCCGCAAGGCCGGAAAACGCCGCATCTGCGAGGGAATGTGCTTTAGTTTACCTTCGCTTGATGATCCATTCAATGATAGACAAGGGAAACCGGAATTTAAAAAGAAGGATCCTAAAAAGAAAACACCTCCCCAAAAAGAGAAGACAGCTCCTGTTAAAGGGAAGAGTAAAGGCACCACAGTTGGTAGAAATGGCGCAAACAATAAAAATCATTCGGAAAATGAAAATGTTGAGGTGAATGAGATGGCAGACGTTTGCTGTGGTGAACAGCATGATAATGAAGTTTCAGACTTCCCTTCCAAATTTGTTTTTTGGTGTCTGAGTGCAATTGAAAATGCACTCCGACATGATGATGCCTATACGGATGGAGAGGGAAACTCTTTCTTTCTTAACCCATGGGGATTAGAATTTTCAAAGCATTTTTCTACTGGTAAAGATCTCATTGACACCGATGGAACCTTTGCTACTACGGAGCAAATTGCATGGATGGTTTCCGCGGCAGCTGATATTTTTGTTAGAAAAGAGAAACAAGGCTTATCATTAGACACCCCTTTTCTTTTGTTCCTTGTCCCTTCCGAAAAAAAAGCTGGCCAGGTTCGAAGAGTTTGCAAGCCTTTGAAATCTGTAGGAATACATACAGTGAGTGTTCATCCGGGTGCTTCCTTAGATCATCAGATTCAAGGTTTGAAAAGTTGTGAGCCTGAATTTCTCATTTCTACTCCTGAGAGGCTCTTGGAGCTTGTTTCATTGAAGGCAATCGATATTTCTGGTATCTCTATGCTGGTTATTGATGGGCTCGATGCTATTTGTAAAGCTGGCCACGCTGATGCAATAAAATCCATCAAGAAGTTTATTTCTGGAAATCCTAGTCTTGTGGTTTTCAATGATAGCTTCAACCATACATCTATCCCAGTGGTTCGGCATCTTCTGACGGGACCTATTTGTAGAATATCTATCAATAACTCAATCGCTAGCCTAAGTTCGTGCATTGTACAGTCTGTTCAAGTGTGTACATCAGACGAAGATAAACATGTTAAGAGCATTGAAGTCCTGCGTCAATTTCGGAGCAGCCAGAGTCATAGCTCAAACCTTCTATATATTTTGAGGAAGGACGTCCAGTGCCATAAATTGGTGAAGGCTCTCAAATCCATGGGTTGTTCCACATCACTCGATTCTGATGCAGCGACTATTAATGATAGTGTGGATTCAAACAGGAGACTGGTTACAATGATTGATTTGGAGGATATCTCTACTGTGGATATAGGGATGTATGATGTAATAGTCCTACCTAGTCTTGTACCCTCTATGGACACTTACGAGCATATTTTGACAAACATGGCCCGTCAAAGTGTCAATGGTGTTTTGCATGGTTTCTTAACAAAAAGCGATACAGAACATGCTGGACCACTCATCTCAATTCTTGAACAATGTGGGCAGGAAGTGCCCGAGACCTTGAAAGATCTTCATCAGGCATCAAACATGTCGGAAGATTGA 1608 0.4173 MAKGDDSVLKKHNKKLRKKQNSKNSVSAKIAAVIAAKKRRKAGKRRICEGMCFSLPSLDDPFNDRQGKPEFKKKDPKKKTPPQKEKTAPVKGKSKGTTVGRNGANNKNHSENENVEVNEMADVCCGEQHDNEVSDFPSKFVFWCLSAIENALRHDDAYTDGEGNSFFLNPWGLEFSKHFSTGKDLIDTDGTFATTEQIAWMVSAAADIFVRKEKQGLSLDTPFLLFLVPSEKKAGQVRRVCKPLKSVGIHTVSVHPGASLDHQIQGLKSCEPEFLISTPERLLELVSLKAIDISGISMLVIDGLDAICKAGHADAIKSIKKFISGNPSLVVFNDSFNHTSIPVVRHLLTGPICRISINNSIASLSSCIVQSVQVCTSDEDKHVKSIEVLRQFRSSQSHSSNLLYILRKDVQCHKLVKALKSMGCSTSLDSDAATINDSVDSNRRLVTMIDLEDISTVDIGMYDVIVLPSLVPSMDTYEHILTNMARQSVNGVLHGFLTKSDTEHAGPLISILEQCGQEVPETLKDLHQASNMSED 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00118 535 Coils Coil 9 29 - -
Mepo4g00118 535 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 12 527 - -
Mepo4g00118 535 Gene3D - 213 364 IPR027417 -
Mepo4g00118 535 Pfam DEAD/DEAH box helicase 218 323 IPR011545 GO:0003676|GO:0005524
Mepo4g00118 535 MobiDBLite consensus disorder prediction 1 110 - -
Mepo4g00118 535 MobiDBLite consensus disorder prediction 63 91 - -
Mepo4g00118 535 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 352 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00118 225 526 Eukaryotic Initiation Factors Gene Family AT1G72730 19.620 6.35e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00118 - - gmx:100809099 688.723