Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00087 ATGACAACAACATCTAACACCAAGCCATTCATTTTTTCCATGATTCTCATGTTAATGCTTGTAGTTCTTTTTTTGGAAAATCTAGTTATCCATGGAGTGACTTCTAACAAGATCAGAATGTTACCTGATCAGCCGAAAGTCGGGTTCAACCAGTTTGCTGGGCACGTCACAGTTGATCATGAAACACACCATAGATCACTCTTCTACTACTTTGTAGAAGCGGAGGTAGATCCTGCTTCAAAACCAGTTGTACTCTGGTTAAACGGAGGACCTGGCTGCTCATCAGTTGGCCAAGGTGCCTTTTCAGAACACGGTCCATTCCGGCCAACAACAAAGGGTCTTGTTAAAAACCCCTTCAGTTGGAACAAAGTAGCTAATATGATCTACTTAGACTCTCCAATTGGTGTTGGTTTCTCATATTCAGCTAACAAGACTGATTATGCTTTTGTGAATGACCAAATTACAGCTAGGGATAACCTGTTGTTTCTACAAGGTTGGTTCTCCAGATTCCCCATGTATCAAAACAATGAATTTTTTATCACTGGGGAAAGCTACGCAGGTCACTTTGCCCCTCAGCTTGCAGAGCTAATCCTCCAAACCAAAGCCAACATAAGACTAAAGGGGATAGCAATGGGAAATCCCCTTCTTGAATTCGACACAGATTTCAGCAGTGGAGCTGAATTTTTGTGGTCACACGGCCAAATCTCTGATTCAACATATCAAATGTTGAAAAATGTTTGCAGTTTTGCCATGATGAAACGAGAGATTCGATCTGGACGACTTAGTGCAGGTTGCCAAGAAACAAACAGATTATTGTCAATTGAGGTCAGCGGATATACTGATAGATTTGATGTTACTGCTGATACTTGTCAACCACAACAAAGTCAACAGGCATATGTGTTGACTAAACTGCAAGCGGAAGAGAAGATTGATGTGTGTGTGGAAGATAAAACCATCACATATCTTAATAGGAAAGAAGTGCAGAAAGCATTGCACACGGATATTAAGCTTGTAGGGCTCAGCCGCTGGTCTACTTGCTCATCAGTTACCGCATATGATTTTCAAAACCTCGAGAATCCTACCATTTCTATGCTAGGGAAACTTGTTAAATCTGGTGTAAGGGTTCTAGCATACAGTGGTGACCAAGATTCGGTCATACCATTGACTGGAACAAGATCCTTAGTGTCTGGGTTGGCCAAAGAGCTTGGGTTGAACACAACAGAGTCCCATAGAGCTTGGTTTAAGGGAAGACAGGTTGCTGGCTGGACCCAAGTATACGGGGACATGCTGACCTTTGCCACCATCAGAGGAGCAGGTCATGAAGCTCCTTCTTCTCAACCAGGGAGGTCTCTGGTGCTTTTTAAGGCCTTTTTGGAAGGAAAACAGCTTCCTAAACATTGA 1401 0.4268 MTTTSNTKPFIFSMILMLMLVVLFLENLVIHGVTSNKIRMLPDQPKVGFNQFAGHVTVDHETHHRSLFYYFVEAEVDPASKPVVLWLNGGPGCSSVGQGAFSEHGPFRPTTKGLVKNPFSWNKVANMIYLDSPIGVGFSYSANKTDYAFVNDQITARDNLLFLQGWFSRFPMYQNNEFFITGESYAGHFAPQLAELILQTKANIRLKGIAMGNPLLEFDTDFSSGAEFLWSHGQISDSTYQMLKNVCSFAMMKREIRSGRLSAGCQETNRLLSIEVSGYTDRFDVTADTCQPQQSQQAYVLTKLQAEEKIDVCVEDKTITYLNRKEVQKALHTDIKLVGLSRWSTCSSVTAYDFQNLENPTISMLGKLVKSGVRVLAYSGDQDSVIPLTGTRSLVSGLAKELGLNTTESHRAWFKGRQVAGWTQVYGDMLTFATIRGAGHEAPSSQPGRSLVLFKAFLEGKQLPKH 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00087 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Mepo4g00087 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Mepo4g00087 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Mepo4g00087 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Mepo4g00087 466 SUPERFAMILY alpha/beta-Hydrolases 46 463 IPR029058 -
Mepo4g00087 466 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Mepo4g00087 466 Pfam Serine carboxypeptidase 46 460 IPR001563 GO:0004185|GO:0006508
Mepo4g00087 466 FunFam Carboxypeptidase 31 464 - -
Mepo4g00087 466 Gene3D alpha/beta hydrolase 26 465 IPR029058 -
Mepo4g00087 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 430 447 IPR033124 GO:0004185
Mepo4g00087 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 447 IPR001563 GO:0004185|GO:0006508
Mepo4g00087 466 FunFam Carboxypeptidase 361 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00087 Mepo-Chr4 2089464 2092799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00087 321 463 Calmodulin-binding Proteins AT2G22960 29.371 2.68e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00087 K16297 - gmx:100805028 610.142