Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo4g00061 | ATGCCAACCATCGCCGCCGTCACTGGTCACGCCTCTGCCGCAGGAATCATGGAAGTGGAGATGGAAAATTCAACATTGACTGAATTGTCTGTACCTGGTTCTGATGTTCAAGATCAAACCCCTCTAGTTTCGTCCCAGCCAACTCAACCACCGGTTATTACTCCTGTCTTGCCACCTCTGGCTCCAATTCCTACAGCTTCTTCCTCTCTTGTCCGACCTCTGGCACCGCTCCCAATCCGCCCACCGGTTATTAGGCCGCCGGTACCACAAAATGGTGAGGTTGGGTCTAGTGATTCTGATTCAGACGATGATGATGATACAGACACCAGAATCAATAAGGGTACTGGGGAGTATGAGATATCAGAAGAGAGTAGACTGGTGAGGGAGCGGCAGGAGAAAGCCATGCAAGACCTTATGATGAGGAGGCGAGCCGCTGCTCTTGCTGTTCCCACCAATGACATGGCAGTCAGGGCCCGTCTTCGCCATCTTGGTGAGCCGATTACTCTCTTTGGTGAGAGGGAGATGGAGAGACGAGATAGGTTGCGGATGATTATGGCAAAGCTGGATGCTGATGGTCAGCTGGAAAAGCTAATGAAAGCTCTTGAGGATGAAGAGGCCGCAACTTCTGCTCCAAAAGATGAGGCTGAGGATGATCTGCAATATCCTTTTTACACTGAAGGGTCAAAGTCTCTCCTTGATGCAAGGATTGATATTGCAAAATATTCTTTACTAAAGGCTGCATTGCGGATTCAACGTGCCCAGAGAAGAAGAGAGGATCCGGATGAAGATGTGGAGGCGGAGATAGATTGGACATTGAATCAGGCAGCGAATTTGAATCTTGAATTCAGTGAAATCGGAGATGATCGACCACTTACTGGTTGCTCGTTCTCCCGGGATGGAAAAGGGCTTGCTACCTGTTCTTTCACTGGAGCTACCAAGTTGTGGAGCATGCCTAATGTTAAAAAAGTTTCTACCTTGAAGGGGCACACCCAGCGTGCTACTGATGTTGCTTATTCTCCTGTGCACAAAAATCATTTAGCAACTGCCTCTGCTGACCGGACAGCAAAGTATTGGAATGATCAAGGAGCTCTTTTGGGAACATTTAAGGGTCATCTTGAACGTCTTGCACGCATTGCCTTCCATCCATCAGGGAAGTACTTGGGCACTGCTAGCTACGACAAGACATGGAGGTTATGGGATGTTGAAACAGAAGAGGAGTTGCTTCTTCAAGAAGGCCATAGTAGAAGTGTATATGGTTTGGATTTCCATCATGATGGATCGTTAGCCGCGTCTTGTGGATTGGACGCACTGGCTCGTGTATGGGACCTTCGAACTGGGAGAAGTGTTCTTGCACTAGAAGGTCATGTCAAATCGATTCTTGGCATCAGTTTTTCTCCCAATGGATATCATTTAGCCACCGGTGGTGAAGATAACACTTGTCGTATTTGGGACTTGAGGAAGAAGAAGTCCTTGTACACCATTCCCGCTCACTCTAATCTAATATCACAGGTCAAATTTGAGCCACACGAGGGTTACTTTTTGGTAACTGCCTCATATGACATGACGGCCAAGGTTTGGTCAGGCCGGGACTTTAAGCCTGTGAAGACACTATCAGGGCATGAAGCTAAAGTTACTTCTCTGGATGTTCTTGGAGATGGTGGGTATATTGTTACCGTCTCCCATGATCGCACCATAAAGCTGTGGTCCAGCGGCATTACTAGTGAGCATGCTATGGATGTTGACTAA | 1746 | 0.4771 | MPTIAAVTGHASAAGIMEVEMENSTLTELSVPGSDVQDQTPLVSSQPTQPPVITPVLPPLAPIPTASSSLVRPLAPLPIRPPVIRPPVPQNGEVGSSDSDSDDDDDTDTRINKGTGEYEISEESRLVRERQEKAMQDLMMRRRAAALAVPTNDMAVRARLRHLGEPITLFGEREMERRDRLRMIMAKLDADGQLEKLMKALEDEEAATSAPKDEAEDDLQYPFYTEGSKSLLDARIDIAKYSLLKAALRIQRAQRRREDPDEDVEAEIDWTLNQAANLNLEFSEIGDDRPLTGCSFSRDGKGLATCSFTGATKLWSMPNVKKVSTLKGHTQRATDVAYSPVHKNHLATASADRTAKYWNDQGALLGTFKGHLERLARIAFHPSGKYLGTASYDKTWRLWDVETEEELLLQEGHSRSVYGLDFHHDGSLAASCGLDALARVWDLRTGRSVLALEGHVKSILGISFSPNGYHLATGGEDNTCRIWDLRKKKSLYTIPAHSNLISQVKFEPHEGYFLVTASYDMTAKVWSGRDFKPVKTLSGHEAKVTSLDVLGDGGYIVTVSHDRTIKLWSSGITSEHAMDVD | 581 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo4g00061 | 581 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 537 | 569 | - | - | |
Mepo4g00061 | 581 | PRINTS | G protein beta WD-40 repeat signature | 387 | 401 | IPR020472 | - | |
Mepo4g00061 | 581 | PRINTS | G protein beta WD-40 repeat signature | 556 | 570 | IPR020472 | - | |
Mepo4g00061 | 581 | PRINTS | G protein beta WD-40 repeat signature | 471 | 485 | IPR020472 | - | |
Mepo4g00061 | 581 | SUPERFAMILY | PRP4-like | 134 | 189 | IPR036285 | - | |
Mepo4g00061 | 581 | Gene3D | - | 452 | 577 | IPR015943 | GO:0005515 | |
Mepo4g00061 | 581 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 429 | 443 | IPR019775 | - | |
Mepo4g00061 | 581 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 326 | 359 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 410 | 451 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | Pfam | pre-mRNA processing factor 4 (PRP4) like | 156 | 182 | IPR014906 | - | |
Mepo4g00061 | 581 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 410 | 447 | - | - | |
Mepo4g00061 | 581 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 494 | 536 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 494 | 527 | - | - | |
Mepo4g00061 | 581 | SMART | WD40_4 | 445 | 484 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | SMART | WD40_4 | 319 | 359 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | SMART | WD40_4 | 530 | 569 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | SMART | WD40_4 | 361 | 400 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | SMART | WD40_4 | 277 | 316 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | SMART | WD40_4 | 403 | 442 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | SMART | WD40_4 | 487 | 527 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | CDD | WD40 | 290 | 569 | - | - | |
Mepo4g00061 | 581 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 368 | 405 | - | - | |
Mepo4g00061 | 581 | FunFam | U4/U6 small nuclear ribonucleoprotein PRP4-like protein | 412 | 581 | - | - | |
Mepo4g00061 | 581 | MobiDBLite | consensus disorder prediction | 79 | 120 | - | - | |
Mepo4g00061 | 581 | MobiDBLite | consensus disorder prediction | 28 | 50 | - | - | |
Mepo4g00061 | 581 | Pfam | WD domain, G-beta repeat | 532 | 569 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | Pfam | WD domain, G-beta repeat | 490 | 527 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | Pfam | WD domain, G-beta repeat | 363 | 400 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | Pfam | WD domain, G-beta repeat | 449 | 484 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | Pfam | WD domain, G-beta repeat | 411 | 442 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | Pfam | WD domain, G-beta repeat | 322 | 359 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 368 | 409 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 452 | 486 | - | - | |
Mepo4g00061 | 581 | Gene3D | - | 127 | 195 | IPR036285 | - | |
Mepo4g00061 | 581 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 537 | 569 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 387 | 401 | IPR019775 | - | |
Mepo4g00061 | 581 | Coils | Coil | 187 | 207 | - | - | |
Mepo4g00061 | 581 | SUPERFAMILY | WD40 repeat-like | 278 | 568 | IPR036322 | GO:0005515 | |
Mepo4g00061 | 581 | MobiDBLite | consensus disorder prediction | 28 | 53 | - | - | |
Mepo4g00061 | 581 | MobiDBLite | consensus disorder prediction | 106 | 120 | - | - | |
Mepo4g00061 | 581 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 326 | 359 | - | - | |
Mepo4g00061 | 581 | SMART | pr04_2 | 151 | 204 | IPR014906 | - | |
Mepo4g00061 | 581 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 452 | 493 | IPR001680 | GO:0005515 | |
Mepo4g00061 | 581 | PANTHER | WD40 REPEAT PROTEIN | 101 | 569 | - | - | |
Mepo4g00061 | 581 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 471 | 485 | IPR019775 | - | |
Mepo4g00061 | 581 | Gene3D | - | 265 | 451 | IPR015943 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo4g00061 | Mepo-Chr4 | 1199476 | 1205568 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo4g00061 | 372 | 568 | U-box Gene Family | AT2G33340 | 22.172 | 2.16e-09 | 58.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo4g00061 | K12662 | - | gmx:100788948 | 863.603 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo4g00061 | 4 | 1199476 | 1205568 | Mepo4g00061 | 4 | 1199476 | 1205568 | ECH |