Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00055 ATGGCAAAGAGGAAGAGCTGGTTTGGATGGGTGAAAGGTCTATTCATTTCTGAGTCAAAGGACAAAAAGCAAAAGAAATGTGGATGGAGATTTGCAAGGATTAAACAAAAGCTATTATACCCCAAAATTACAGCTTCAAACAGGACTTTGATTGAAGCAAGTGCAGAACAGAGAAAGCATGCATTGGCTGTGGCTATTGCAACAGCATCTGCTGCAGAGGCTGCTATTGCTGCTGCACATGCTGCTGCTGAGGTCGTCAAGCTCACAGGTGGCGCCTCTCGTTCTTATTCGTATCTATCCAAGGGAGACAGAAGTTTGGCTGCCATCAAGATTCAAAGTGTCTACCGTGCGCATCTTGCTAGGAAAGCATTAAGAGCATTGAAGGGAGTTATAAGACTTCAAGCCATAATTCGCGGTGAAGCTGTTAGGCGTCGAGTGTCTAGAACTTTGAAGAATATTCCCTCAAATGCAAAAACTCAGAAGCAAATCCAGGAAAGAAGCATCCATACAAAGGAAGAAAACTACAAAAATGATCATATAAGACAGTTTCCAAAGCAAAAGATAAAGATAGAAGAGAATGAACTTAAGCCTGAACTCCATAGTCAAAGAACTTGGAATTGTAGCTCACACTCGAGAGAAGACATTGAAGCAATATGGTTAAGAAAGCAAGAGGCTATTGTCAAAAGAGACCGCATGAGGCAATACTCTTCTTCGCAAAAGGAGAGAATGTTTTCCCAAATGGTGGAAGAATCTTTGCACAACAAAGAATTTGTTGAAGATAATTGTCGTACTCTAGGAGAGTGGCTACATAAAGAACCATGTAACTGGGATGTTCTTTATAAACCAGCTCATCCTTCAAATATCACAATAAGAAATGAAGTGCAAGAAGGATTGAAATCACAAGTTTCAGTCCAAAGAAAATCATTTTCTCATGTAAAAAGAAGTTCAATCGGAGATGAGAGTTCTCTGCCGAATTCTCCGGTTTTTCCTAAGTACATGGCTGTGACTGAATCTAGCAAAGCAAAAGTAAGGTCTATGAGCACACCACGGCAAAGAACAGGATTTTCGGATGTGTGTTCAAATCGGAATGAGAACCAATGCATGAATTTTTAA 1113 0.4025 MAKRKSWFGWVKGLFISESKDKKQKKCGWRFARIKQKLLYPKITASNRTLIEASAEQRKHALAVAIATASAAEAAIAAAHAAAEVVKLTGGASRSYSYLSKGDRSLAAIKIQSVYRAHLARKALRALKGVIRLQAIIRGEAVRRRVSRTLKNIPSNAKTQKQIQERSIHTKEENYKNDHIRQFPKQKIKIEENELKPELHSQRTWNCSSHSREDIEAIWLRKQEAIVKRDRMRQYSSSQKERMFSQMVEESLHNKEFVEDNCRTLGEWLHKEPCNWDVLYKPAHPSNITIRNEVQEGLKSQVSVQRKSFSHVKRSSIGDESSLPNSPVFPKYMAVTESSKAKVRSMSTPRQRTGFSDVCSNRNENQCMNF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00055 370 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Mepo4g00055 370 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Mepo4g00055 370 SMART iq_5 103 125 IPR000048 GO:0005515
Mepo4g00055 370 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Mepo4g00055 370 PANTHER IQ-DOMAIN 5-RELATED 6 359 - -
Mepo4g00055 370 Pfam Protein of unknown function (DUF4005) 319 353 IPR025064 -
Mepo4g00055 370 Gene3D - 94 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00055 Mepo-Chr4 1011541 1013923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00055 1 357 IQD Protein Family AT5G03960 44.565 4.49e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00055 - - gmx:100800767 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00055 4 1011541 1013923 Mepo4g00055 4 1011541 1013923 ECH