Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00036 ATGAAAAAATTAATGAATGATAGGGCGCTTGTCAGACATCTTTCTGCATGTGAGACTATGGGTTCAGCTAGTTGCATTTGCACTGATAAAACAGGAACGTTGACGACCAACCATATGGTGGTTGATAAAATTTGGATATGTGAAAAGACTGTGGAGATGAAAGGTGATGAAAGTACCGATAAGTTGAAAGCAGAGATTTCTGATGAAGTTCTAAGCATCCTTTTGCAGGCTATATTTCAGAATACTTCTTCGGAAGTAGTTAAAGACAAAGAAGGAAAACAGACAATACTGGGAACACCAACAGAATCAGCAATATTGGAATTTGGCTTGGTTTCAGGTGGTGATTTCGATGCACAGCGTAGATCCTGTAAGGTACTTAAGGTTGAGCCTTTCAATTTAGACAGGAAGAAGATATCGGTGCTAGTGGGTCTTCCTAATGGAGGGGTCCGAGCTTTCTGCAAAGGTGCATCAGAAATCGTGCTGAAAATGTGCGATAAAATCATTGATAGTAATGGAACAACTATTGATCTTCCTGAAGAGAAAGCAAAGATTGTGAATGACATTATAGATGGATTTGCCAATGAATCTTTGAGAACTCTTTGTTTGGCTGTCAAAGACATAGATGAAACACAAGGAGAAACCAACATCCCTGAGAATGGATATACTCTGATAGCCATTGTGGGAATCAAGGATCCTGTGCGCCCTGGAGTTAAGGAAGCTGTTCAAAAATGTTTAGCAGCAGGAACAAGCGTTCGCATGGTCACCGGCAATAACATAAATACAGCTAAGGCTATAGCTAAAGAATGCGGTATACTTACTGAGGGAGGTGTAGCTATAGAAGGACCAGAGTTTCGCAATCTGTCTGAGGAGCAAATGAAGGATATCATACCTAGAATTCAGGTAATGGCACAATCCTTGCCTCTTGACAAGCATACCCTGGTAACCCGTTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTTACTGGTGATGGAACCAACGATGCTCCTGCATGCACGAGTCAGACATTGGACTTGCCATGGGCATTGCCGGAACCGAGGTTTGTCTCTAGTGCTGCTCCACTAACTGCTGTTCAATTGCTTTGGGTTAACTTGATTATGGACACTCTTGGTGCATTGGCTTTGGCTACTGAACCTCCTAATGATGGACTTATGGAAAGACAACCAGTTGGAAGGAAAGCAAGTTTTATTACCAAACCAATGTGGAGGAATATCTTCGGTCAAAGTTTGTATCAACTGATTGTCCTTGGAGTTCTAAATTTTGAGGGGAAGAGGCTGCTGGGACTAAGTGGCCCAGATTCAACTGCTGTACTCAACACTTTGATATTCAACTCCTTTGTATTTTGCCAGTTCAGCTGCTTTATTGCTTTTGAGGCCAATCAAATCCTAAACATCCCTCGCTCTTGGCGCCTACCTGAGGACAAGACACAAGAGGATTTGGAGCTGGGAAAGGAGTGGTCTCTATTCTGTTCGATCGGCATATCATCTATTCAAGCTGGAGATACTCAGAGATAA 1533 0.4234 MKKLMNDRALVRHLSACETMGSASCICTDKTGTLTTNHMVVDKIWICEKTVEMKGDESTDKLKAEISDEVLSILLQAIFQNTSSEVVKDKEGKQTILGTPTESAILEFGLVSGGDFDAQRRSCKVLKVEPFNLDRKKISVLVGLPNGGVRAFCKGASEIVLKMCDKIIDSNGTTIDLPEEKAKIVNDIIDGFANESLRTLCLAVKDIDETQGETNIPENGYTLIAIVGIKDPVRPGVKEAVQKCLAAGTSVRMVTGNNINTAKAIAKECGILTEGGVAIEGPEFRNLSEEQMKDIIPRIQVMAQSLPLDKHTLVTRLRNMFGEVVAVTGDGTNDAPACTSQTLDLPWALPEPRFVSSAAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMERQPVGRKASFITKPMWRNIFGQSLYQLIVLGVLNFEGKRLLGLSGPDSTAVLNTLIFNSFVFCQFSCFIAFEANQILNIPRSWRLPEDKTQEDLELGKEWSLFCSIGISSIQAGDTQR 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00036 510 ProSitePatterns E1-E2 ATPases phosphorylation site. 29 35 IPR018303 -
Mepo4g00036 510 Gene3D - 347 501 - -
Mepo4g00036 510 FunFam Calcium-transporting ATPase 37 232 - -
Mepo4g00036 510 Gene3D - 2 23 - -
Mepo4g00036 510 PRINTS P-type cation-transporting ATPase superfamily signature 247 257 - -
Mepo4g00036 510 PRINTS P-type cation-transporting ATPase superfamily signature 328 347 - -
Mepo4g00036 510 PRINTS P-type cation-transporting ATPase superfamily signature 27 41 - -
Mepo4g00036 510 PRINTS P-type cation-transporting ATPase superfamily signature 225 236 - -
Mepo4g00036 510 Pfam Cation transport ATPase (P-type) 83 167 - -
Mepo4g00036 510 PRINTS Sodium/potassium-transporting ATPase signature 20 41 - -
Mepo4g00036 510 PRINTS Sodium/potassium-transporting ATPase signature 151 169 - -
Mepo4g00036 510 SFLD Haloacid Dehalogenase 9 338 - -
Mepo4g00036 510 Gene3D - 24 337 IPR023214 -
Mepo4g00036 510 Pfam Cation transporting ATPase, C-terminus 359 465 IPR006068 -
Mepo4g00036 510 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 461 IPR023298 -
Mepo4g00036 510 Gene3D - 37 232 IPR023299 GO:0000166
Mepo4g00036 510 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 33 237 IPR023299 GO:0000166
Mepo4g00036 510 SUPERFAMILY HAD-like 15 339 IPR036412 -
Mepo4g00036 510 SFLD p-type atpase 9 338 IPR044492 -
Mepo4g00036 510 PANTHER CATION TRANSPORTING ATPASE 1 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00036 Mepo-Chr4 817964 820502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00036 1 456 Primary Pumps ATPases AT3G57330 61.961 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00036 K01537 - gmx:100785768 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00036 4 817964 820502 Mepo4g00036 4 817964 820502 ECH