Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00027 ATGGGTGGCATAGGAAAGACAACTCTAGCCAAACATGTCTACAAGAAAATCCATAACCAATTTGATGTCAGTTGCTTTCTTGAGAATGTTAGAGAGGTTTCTAGTGAAAGAGATGAGAATTTAGCTGGAAAGCAAGAATGGTTTGGTCCAGGGAGCAGGGTAATAATAACAGCTAGGGACAAGCATCTCCTAGTATCACTCGGTGTGTGTGAAATCTTAAACAGTGATGAATCCCTTCAACTTTTTTCTCAAAAAGCTTTTAGAAGTGGAAAACCTGAAGAAGGTTTCATAGAGTTGTCAAAACGGGTGGTTCAATGTGCTGGAGGTATTCCCTTGGCACTCAAAGTGTTGGGTTCATTCCTCTGTGGAAGGAAGGCATCTGTATGGGAAGGCGCTTTGAAAATGTTGCAGCAGGACCTGCAAAATGATATTTACAAGACATTAAGAATAAGTTATGATGGATTGCGGGATACGGAAAAGGCGATATTTCTAGATATTGCTTGTTTTTTCAAAGGGAGCCTCAAGGATCATGTGACACAAATATTGGAAAATTGTGGTCTTAATCCATTGATTCGTATAGACGTTCTTATTGAAAAATCATTAATAACTTATGATGGGTGGCATTTGGGGATGCATGATTTGCTTCAAGAAATGGGTAGAAATATTGTTCTCCATGAATCTCTTAATGATGCCGGCAAGCGGAGTAGGTTGTGGTCTCTAAAGGACATTGATCAAGTATTGAGAAATAATAAGGGAACTGAATCTACTCAAGCAATAGTTCTAAATCTGTCTGAAGCATTTGAAGCAAGGTGGAACCCTGAGGCTTTTGCAAAGATGGGTAATCTTAGATTGCTCATGATATTAAATAAATTGCAACTTCAACTTGGTCTCAAATGTCTTCCCAGTGGGTTAAAAGTTCTTGCATGGAAGGAATGTCATCTCGAGTCATTGCTAATTGGAGATCAGTCGGACGAACTTGTTGACCTTGATATGTGTCATAGCAAAATAAAGCACCTTTGGAAAGGAACAAAGCTTCTGGGAAATTTGAAGACCATCAATTTGAAAAACTCCAAATATCTACATCAAACTCCAGACTTCGCTGGAATTCCAAATCTTGAAAAATTGGATCTTGAAGGCTGCATAAACCTAGTTGAGGTTCATGCTTCTCTTGGACTTCTTAAAAAGATTTCATATGTGACATTAGAGGATTGCAAAAATCTTAAAAGCCTTCCAGGAAAATTGGAAATGAATTCTTTGAAGCGTCTTGTTCTAACAGGCTGCACAGCAGTTAGAAAGCTTCCTGATTTCGGGGAAAGTATGACAAATCTATCCACACTTGCTTTGGATGGGATTCCCATAGCTGAACTACCTCCAACTATTGGTTACTTGACAGGACTAGCACGGAACTCAAAGAGCTCACTCCTCCCTTTGGGTAAGATCTTCGGGTTTGGTACTCATCCAATTCCCAAGAAATTAATCTTGCCTTCTTTTTCTGGTCTATCCTCGTTGAAGAAACTAGACTTAAGCTATTGCAATCTCTATGATGAATCAATTCCTGATGATCTTGGTTGTTTATCTTCACTGGTAACATTAGATATTAGCGGGAATAATTTTGTGAATCTTTGTGATGGCTGCATATCAAAACTTTTGAAGCTAGAAAGACTTGTGTTGAGTAGCTGCCAAAACCTGCAGTCGTTACCTAATCTACCACCAAATGTACATTTTGTTAATACAAGTGATTGCGGTTCATTGAAACCCTTGTCAAATCCACAAGAGATATGGGGTCACTTGGCATCATTTGCTTTTGATAAGTTGCAAGATGCAAATCAGATCAAAACATTATTGGTAAGTCCTGGAAACGAAATTCCATCAACTTTTTTCTATCAAAATTATTTTGACCGGGACATACAATATTTAAAAGATAACTACATATGGGCTGATTCTACTGTGTCAATATCGATAAACATGGCTCAACTTCATCAACGGTATGATAGAAGTGAATGGTGGGGACTTTTGGTTTCCCTTGTCATAGAAGATGTGGTGTCTTCTACACCTTCCCAGGACTATCGTGTTGGTTGGATTTCAAAAGTTCCTGTTACCAATAACTTTTTGTGCCAGCTATGTCAAAAGTTGTTGGAGCATGGTTTCATTTCTGGAGTACCGAATTCCAAGCATCCTCACCTATTGGTTTTGTATATCCCTGTTCCTGCATCCCGTTGGTCTTATGTTCAAGACAAGTTTCAGTTAATATTTTTCAGTTCTAGTCTTAAGAGCTTTGTTTGCGAGTTGAGTTTTGGAGGGGAGAGGAAAGGAAGGAAAGGCTTACGGAGAGGTAACTGTGAAATTACCGTCGAAGCCAGCACTTTCACCTGCAATTCCAGTTCCAACGAACTCTTAATCTCTCTTCCTCGTAGCGGAAATATCAAAGTATCTGATGTTTCTGCAAACCATAAAAGCGCTTCTGAGAATTTCACTCCTGAAGAGAGAGAACATGAGTTCGTGCTGGTTAATCCTAAAGATGATGATGATATTACCAAATCATACCTTCAGGAGGTATTACAGATGTATATGACAGAGCTACCTGGGATGAATTATGCTGCAAATACCGGAAAGCAATCAAAGTTTCTTGAGAGATGTGTGACTAATGGGAAATATCGAACACTACTTCTGAAATCCAGTTTGGCTGGAGATTCAGGAAAGGTTTTGGCTGCAATTACTTATCAAATCGTCCCTGCAGACACAGAATATGCAGAGATCCCTCTCGCAGCTGTTAATGCAATCTATCAACGGAAGGGTTTTGGTCAGATATTGTTTCTAGAGCTCCGGAAGAGACTTCAACATGTTGGCATTCGCTCTATTTTCTGTTGGGGAGACAAAGAATCTGAAGGATTTTGGCTTAAACAGGGTTTTTCATCAATAGCACAGGTGGATACAAAAGGTAGAGCCCGCAGGTTACCTGTAAAAGCTGATATTCGTAAAGCATTATGCTTTCCTGGTGGTTCGACTCTCATGATTCTCCATCTAAAGAAGGAATTGTTTGATGACAATGCCAGCTCTGGGAAGTGTCTCCCCTCACAGCCTCATCAGAATTCCTTTACACCTGCAATTGTTGAAGATGAGCAGCTCGAATTCTCAGATGAACTACTCATTAACTTGAAATCTTCCCATAGAACAGACACAAGTCAAAGTAAACCCAATTCTTTGGTAAAAGTTGGACCTTCACGAAGACGTGGAAAACTCAATGGATTTGACAGTCAGAATCCTAAGAACTGCTGCAATGATACTGTTGATTTTGCCAGAGCAAATGATGACAGACAAGCAAATGGTGCAGATTGTACCCAGGATGAAAATTATGCTAATGTAGCGAATTGTTCTCAATCTACAAAAGTTTTAAAGAGGGCCTGGGAAGCCTCTTCATCCTCGTTGAAGTCAAAGAGAGTGAGGGGAAGCCAGTTTGTTGACTGTCGATCAGATTCTAGCTGGGGTTTTGTCTCCGAGGCTGGTAGGGCCAATCCTTGTTCTGCGGAATCCCCTCATTGTGATACTTTAATTACAAAGAACTCTGAAAAATGTATTGGAGACCATATGCATTTAGAAGCTCCGATCAGCCTAAAACTGCCATCAACTGAACAATGCTTTAGAATCATGTTGATGAACATCACTGATGACACTAAGAAAACACAGCCTACAAAGGTGATTGAAGACCTAGGTGGAACTATTGCTTCTGATGGAAGCTCAACCACACATGTTGTCACAGGACAAATTATTAGAATCTTAGCATCTCTTGGTTTAAATAAATTTTTGGAAGTACATTTCCCTAATCTCTAG 3828 0.3966 MGGIGKTTLAKHVYKKIHNQFDVSCFLENVREVSSERDENLAGKQEWFGPGSRVIITARDKHLLVSLGVCEILNSDESLQLFSQKAFRSGKPEEGFIELSKRVVQCAGGIPLALKVLGSFLCGRKASVWEGALKMLQQDLQNDIYKTLRISYDGLRDTEKAIFLDIACFFKGSLKDHVTQILENCGLNPLIRIDVLIEKSLITYDGWHLGMHDLLQEMGRNIVLHESLNDAGKRSRLWSLKDIDQVLRNNKGTESTQAIVLNLSEAFEARWNPEAFAKMGNLRLLMILNKLQLQLGLKCLPSGLKVLAWKECHLESLLIGDQSDELVDLDMCHSKIKHLWKGTKLLGNLKTINLKNSKYLHQTPDFAGIPNLEKLDLEGCINLVEVHASLGLLKKISYVTLEDCKNLKSLPGKLEMNSLKRLVLTGCTAVRKLPDFGESMTNLSTLALDGIPIAELPPTIGYLTGLARNSKSSLLPLGKIFGFGTHPIPKKLILPSFSGLSSLKKLDLSYCNLYDESIPDDLGCLSSLVTLDISGNNFVNLCDGCISKLLKLERLVLSSCQNLQSLPNLPPNVHFVNTSDCGSLKPLSNPQEIWGHLASFAFDKLQDANQIKTLLVSPGNEIPSTFFYQNYFDRDIQYLKDNYIWADSTVSISINMAQLHQRYDRSEWWGLLVSLVIEDVVSSTPSQDYRVGWISKVPVTNNFLCQLCQKLLEHGFISGVPNSKHPHLLVLYIPVPASRWSYVQDKFQLIFFSSSLKSFVCELSFGGERKGRKGLRRGNCEITVEASTFTCNSSSNELLISLPRSGNIKVSDVSANHKSASENFTPEEREHEFVLVNPKDDDDITKSYLQEVLQMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLLLKSSLAGDSGKVLAAITYQIVPADTEYAEIPLAAVNAIYQRKGFGQILFLELRKRLQHVGIRSIFCWGDKESEGFWLKQGFSSIAQVDTKGRARRLPVKADIRKALCFPGGSTLMILHLKKELFDDNASSGKCLPSQPHQNSFTPAIVEDEQLEFSDELLINLKSSHRTDTSQSKPNSLVKVGPSRRRGKLNGFDSQNPKNCCNDTVDFARANDDRQANGADCTQDENYANVANCSQSTKVLKRAWEASSSSLKSKRVRGSQFVDCRSDSSWGFVSEAGRANPCSAESPHCDTLITKNSEKCIGDHMHLEAPISLKLPSTEQCFRIMLMNITDDTKKTQPTKVIEDLGGTIASDGSSTTHVVTGQIIRILASLGLNKFLEVHFPNL 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00027 1275 MobiDBLite consensus disorder prediction 1055 1069 - -
Mepo4g00027 1275 CDD NAT_SF 894 956 - -
Mepo4g00027 1275 FunFam Disease resistance protein (TIR-NBS-LRR class) 74 156 - -
Mepo4g00027 1275 Gene3D - 72 156 IPR042197 -
Mepo4g00027 1275 Gene3D Ribonuclease Inhibitor 440 640 IPR032675 -
Mepo4g00027 1275 SUPERFAMILY L domain-like 258 586 - -
Mepo4g00027 1275 Gene3D - 830 984 - -
Mepo4g00027 1275 Gene3D Ribonuclease Inhibitor 235 439 IPR032675 -
Mepo4g00027 1275 MobiDBLite consensus disorder prediction 1055 1083 - -
Mepo4g00027 1275 SUPERFAMILY "Winged helix" DNA-binding domain 143 247 IPR036390 -
Mepo4g00027 1275 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 844 976 IPR016181 -
Mepo4g00027 1275 Pfam NB-ARC domain 51 153 IPR002182 GO:0043531
Mepo4g00027 1275 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 839 992 IPR000182 GO:0016747
Mepo4g00027 1275 Pfam Leucine Rich Repeat 326 344 IPR011713 -
Mepo4g00027 1275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 166 IPR027417 -
Mepo4g00027 1275 Gene3D - 1 45 IPR027417 -
Mepo4g00027 1275 PRINTS Disease resistance protein signature 498 514 - -
Mepo4g00027 1275 PRINTS Disease resistance protein signature 107 121 - -
Mepo4g00027 1275 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 35 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00027 Mepo-Chr4 720343 732666 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00027 1 587 WRKY Transcription Factor Family AT5G45050 30.994 3.60e-64 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mepo4g00027 NB-ARC 2.8e-09 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00027 - - tpra:123888765 796.964