Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00022 ATGGTTTCTGAAAACTCACTCTCTTCTTCTAAGCACTCTTCTACTACCACTACTCCTAAATTCTGCAACTCATACACTACTAGGATTTTTGCTGATGTTGCTGGTGACATTACAATTGTTGCTGATGGCGAGTCATTTCTGCTACATAAGTTTCCCTTGGTTACCCTAAGTGGAAAGATCCGGAAGATGGTTGCTGAAGCCAACAAGGGTTCTAGTGTTTCAAACTTGGAGCTTCCTAATTTTCCAGGAGGACACCAGACATTTGAACTTGCGATGAAGTTCTGTTATGGAATGAATTTCGAAATAACGACATTTAATGTTGCCCGACTACGCTGTGCAGCCGAGTACCTAGAAATGACAGAAGAATACCGGGATCAAAACCTCATCTCAAGAACAGATATTTATCTGAATGAGATTGTCTTTCAAAATCTTCAGAGGTCAGTGGAAGTTCTATCTACCTGTGAGATGTTACCTCTAAATATAGTGGAGGAGATAGAAATCACAAAAGGATCTGTGGAAGCTATTGCAATGAATGCTTGCAAAGAGCAATTAGTTTCTGGTTTATCTAAATTACACTGTGATGGTGAATCTAAGGAAATAAAGGATGAGTGCGTGGCATGGTGGATTGAAGATCTCTCGATACTGCGGTATTGGGAAGTGTCAATTATGGAATCAATCAAGGACAAATTCAAGTCCAACCACTATAGAAAAGGACCAGAGGACAATTGTGGAAACTGTTGTCAACCTCATGCCAACAGACAAAAGCTCTTCCATCATTCCCCTGACTTTCTTGTTTGGCATGTTAAAGATGGCTATCATGTTAGGTGCCACCATTCCATGTAG 843 0.4045 MVSENSLSSSKHSSTTTTPKFCNSYTTRIFADVAGDITIVADGESFLLHKFPLVTLSGKIRKMVAEANKGSSVSNLELPNFPGGHQTFELAMKFCYGMNFEITTFNVARLRCAAEYLEMTEEYRDQNLISRTDIYLNEIVFQNLQRSVEVLSTCEMLPLNIVEEIEITKGSVEAIAMNACKEQLVSGLSKLHCDGESKEIKDECVAWWIEDLSILRYWEVSIMESIKDKFKSNHYRKGPEDNCGNCCQPHANRQKLFHHSPDFLVWHVKDGYHVRCHHSM 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00022 280 ProSiteProfiles BTB domain profile. 35 104 IPR000210 GO:0005515
Mepo4g00022 280 Gene3D Potassium Channel Kv1.1; Chain A 12 126 IPR011333 -
Mepo4g00022 280 PANTHER OS12G0117600 PROTEIN 32 217 IPR043454 -
Mepo4g00022 280 SUPERFAMILY POZ domain 24 121 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00022 Mepo-Chr4 640456 641885 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00022 31 216 EF-hand Containing Proteins AT2G47860 41.232 2.27e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mepo4g00022 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00022 - - mtr:11433631 410.223