Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo49g00022 ATGTCTTCTTCACTCGTCAAGATCCAAGACGATCTTCACCGTCTTTCAATCAAAGATCTGATTGAAAATGGGAGTGAAGAAGAGGAGAATCATCATGTTGGATTTGGAAAACATGGTGGAACGTGCGCAATTTGTTTAGATAAGATAGTGTTGCAAGAAACTGCTCTTGTTAAAGGTTGCGAGCATGCTTACTGTGTAACATGCATCCTTCATTGGGCCACATACAGTCAGAAAGTTACCTGCCCTCAGTGCAAACATCCATTTGAGTTCCTAACTGTTCATCGCACACTTGATGGAAGTATTCGAGATTACATGTTTGAGGAAAGTGTTTGCCTACTACTTCGGGCCCAATGGTTCAAGCCTTTAACCGTTGAAGAGCGTGTGGTTGAAGAAGATATCTATGAAGAATTAGTTGACTACTATTATCAGTTTGAAAATGACGATGATCTAGATGATGAGGATTATTATGGTGGTTCAGCTAGTGTACGGATTGGCAACCGTAGATGGGGAGACAACGGTTTTGTAAGGGCTGGGCGTCAAGAAGCTCGGCCGGTCCATCGACCAAGCTTCCAGGATTCAGGAGCAAGCTCAAGTTCATCGCGCGAGCCAAAAAAGAAAGAGGATTCAAAAGTTATGACAGGGAGACGGGCGAAGAGGGCGCTGAAAAGAGAAGCTGCTGATAAGGCAGCTGAAGCAAAGCATCAGCAGCATTTGGCTAGTGATTCTATGCTCTATGAAGCATGTGATAGAATGTGGGGAAGCTGTTTTAGAATAATGGCTTGGTTGATAGAATCCTTTAACTCAATGTATGATTGA 816 0.4326 MSSSLVKIQDDLHRLSIKDLIENGSEEEENHHVGFGKHGGTCAICLDKIVLQETALVKGCEHAYCVTCILHWATYSQKVTCPQCKHPFEFLTVHRTLDGSIRDYMFEESVCLLLRAQWFKPLTVEERVVEEDIYEELVDYYYQFENDDDLDDEDYYGGSASVRIGNRRWGDNGFVRAGRQEARPVHRPSFQDSGASSSSSREPKKKEDSKVMTGRRAKRALKREAADKAAEAKHQQHLASDSMLYEACDRMWGSCFRIMAWLIESFNSMYD 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo49g00022 271 CDD RING-HC_Topors 41 88 - -
Mepo49g00022 271 ProSitePatterns Zinc finger RING-type signature. 60 69 IPR017907 -
Mepo49g00022 271 MobiDBLite consensus disorder prediction 180 217 - -
Mepo49g00022 271 MobiDBLite consensus disorder prediction 199 217 - -
Mepo49g00022 271 Pfam Ring finger domain 41 85 IPR001841 -
Mepo49g00022 271 SUPERFAMILY RING/U-box 41 92 - -
Mepo49g00022 271 SMART ring_2 42 84 IPR001841 -
Mepo49g00022 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 110 IPR013083 -
Mepo49g00022 271 ProSiteProfiles Zinc finger RING-type profile. 42 85 IPR001841 -
Mepo49g00022 271 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 10 239 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo49g00022 27 238 C3H Transcription Factor Family AT5G19430 61.818 6.61e-78 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo49g00022 - - gmx:100777135 322.013