Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo49g00021 ATGGCTGGACACAACATGCAAATGTCCCTCTCAAGCTCCTCAAATGACTCCTCAGACCAAGAAACCCCTTTCAACACATCAATGAACCCAACAACCGTTGTTGGAGGCTCCTCCTCTCACCAACAAACACCAACCTCAACCGATTCACCAAACCAGCTACCAACTTCACCACCCTACAAAAAGCCACGTGGAAGACCACCTGGTTCCAAAAACAAACCGAAACCACCTCTTGTCATAACACAAGACAATGAACAAGCCATGAAACCTGTAGTCATTGAAGTAGCTGCAGGTACAGATGTTCTTGAAGCTGTCATCCAGTTTGCACTCCGTTTTCAAACATGTTTGAGCATTCTCTCTGCTTCTGGCACCATTGCTAATGCTACCATTTATTACCCTCTTTGTCGTGCTCCTTCTTTTACTCTTCATGGTCCTTTTTCTTTGATGAGTTTGACTGGTACTTTTTTGTACCCTCCTTCACCTCCACCACCATCACCACCACTTCCTATTGGTTCTTCTTCTTCTTCTTCTTCCTCAAACCCTAATGTGAATCCATTGGAAGCACCGCCACCGGGTATGACTTTTGGGATTACTCTTGCTGGATTACAAGGGCAAGTCTTTGGTGGGATTATTGGTGGAAAAGTTATAGCTGGTGGTGATGGGGTTAAGGTTGTATGTTCTTTGTTTAAGAATCCCGAACTTCATAGAGCTGGTGGTATTATTCTGGAAGCTGATGATGGTGGTGATGATGATAATAATAACGTTAATGGAAATGGTGATGGTGGTGGTGATGATGGTGGTGATCCTGGTGCTAGTAGTAGTGGTGCTGGTGAGAATGTGTCTGGTTTCAATGTTCCAGATCCAATGCCTCTGAATCTAGCACAATCTGATCCTAGCTTCATGCCTTGGAACCAACCTTCTCACCCTCATCCTCCTAATTACTGA 942 0.4459 MAGHNMQMSLSSSSNDSSDQETPFNTSMNPTTVVGGSSSHQQTPTSTDSPNQLPTSPPYKKPRGRPPGSKNKPKPPLVITQDNEQAMKPVVIEVAAGTDVLEAVIQFALRFQTCLSILSASGTIANATIYYPLCRAPSFTLHGPFSLMSLTGTFLYPPSPPPPSPPLPIGSSSSSSSSNPNVNPLEAPPPGMTFGITLAGLQGQVFGGIIGGKVIAGGDGVKVVCSLFKNPELHRAGGIILEADDGGDDDNNNVNGNGDGGGDDGGDPGASSSGAGENVSGFNVPDPMPLNLAQSDPSFMPWNQPSHPHPPNY 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo49g00021 313 SUPERFAMILY AF0104/ALDC/Ptd012-like 85 232 - -
Mepo49g00021 313 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 22 271 IPR014476 GO:0003680
Mepo49g00021 313 MobiDBLite consensus disorder prediction 244 313 - -
Mepo49g00021 313 MobiDBLite consensus disorder prediction 159 188 - -
Mepo49g00021 313 ProSiteProfiles PPC domain profile profile. 84 253 IPR005175 -
Mepo49g00021 313 MobiDBLite consensus disorder prediction 1 54 - -
Mepo49g00021 313 CDD DUF296 88 227 IPR005175 -
Mepo49g00021 313 PIRSF ESCAROLA 175 311 IPR014476 GO:0003680
Mepo49g00021 313 PIRSF ESCAROLA 2 170 IPR014476 GO:0003680
Mepo49g00021 313 Gene3D - 87 243 - -
Mepo49g00021 313 MobiDBLite consensus disorder prediction 55 73 - -
Mepo49g00021 313 MobiDBLite consensus disorder prediction 1 82 - -
Mepo49g00021 313 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 225 IPR005175 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo49g00021 43 267 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.683 1.02e-36 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo49g00021 - - tpra:123915288 297.36