Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo49g00012 ATGACCCTTCTTCCTACCATGCTTGTTATTACAAAGTTACTATTATTCTTCTCCAAAATTTCCATTGCAATCGATACCATTACACAATCACAACCACTTTATGATAGCAACACCTTGGTTTCTAAGGATGGAACCTTTGAGTTGGGTTTCTTCAATCCTGGTAATTCCAACAACCGCTATGTTGGAATTTGGTACAAAAATATCCCTGTTAGAAGAGTTGTTTGGGTTGCCAATCGCGACAACCCAATCAAAGACACTTCTAGCAAGTTGATCATAAGTCAAGATGGAAACCTTGTACTTCTCAATCAAAATCAATCTCTTTTATGGTCAACAACAAACACAACAACAACAACAAGAAAGGTTTTGATTTCGAGTCCCATTGTGCAACTCTTGGACAATGGAAATTTAGTGCTTAAAAACGATGGCGAAGAAATTTTTGTGTGGCAGAGCTTTGATTATCCTTGTGATACAATATTACCAGGAATGAAGACTGGATGGGACAAAAAAAGGGGTCTTGAGAGACGTTTAACTGCATGGAAAAATTGGGATGATCCATCTTTAGGTGAGCTTACTTCAGCTATGGTACTAACTCCAAACCCTGAAAGCTTTATGTGGAAAGGCTCGACGAAATTCTATAGGACAGCACCATGGACCGGTCCTCGATCTAGTGGAATAATTGGATTCAAAGAAAATCCACTTTTTAATTTTGAATTTGTCAACAACGAAGACGAGGTATATTATATGTTCACACTCAAGAATAGTTCTGTGGTTTCCATAATTGTTTTTAACGAAACAGTTTCTCTTCGTCAACGCCTCATTTGGATTCCAGAATCCAAAATATGGAAGATTTACCAAATCTTACCACAAGATAGTTGTGATACATACAATGTATGTGGAGAAAATGGACAGTGTGTGCTTGATGCATCACCTATGTGTCAATGTTTAGATGGGTTTAAGGCGAAATCGCCACAACAGTGGAATGCAATGGACTGGACAGGTGGATGTGTGCGTAATGGTAATTGGAGTTGTGGGGACAAAAACAAAGATGGGTTTAAAAAAATTGTTGGGATGAAAATGCCAGATACTACACATTCTTGGATTGATGAGAAAATGACACTTGAAGATTGCAAGGTTAGATGTTTGCAAAATTGTTCCTGCACTGCTTACTCAAGTTTAGATTCAACTGGAACAAATAATGGCTGTTCTATCTGGTTTGGTGATCTTCTTGATCTGAGAGTTTCACCAAGTGGAAAAGATTTATATGTTCGAATGGACGCTTCATATATCGGTGATAAAAATGGGCATACCAAAGCAGTAGTATTGTCAGTTTCGATTACAATTTCAGTAGTTCTTGTGATATTGGCATTCACCTACATTTATATAACAAAGGCAAAGTATAAAGAGAAAATAGAGAAGATCACAAGGTCAGAAGAGAATGATGAAGAAACACATGAAGATTTTGAGCTTCCCATCTTTGATCAAGCTACAATACGCAAGGCAACAAATAACTTCTCTTATGACAACAAGCTTGGGGAAGGCGGTTTTGGACCAGTATACAAGGGTACATTGCTTGATGGACAAGAAATTGCTGTCAAAAGGCTTTCAAAGAGTTCTGGACAAGGACAAAAAGAGTTTAAAAATGAAGTTATATTATGTGCTAAACTTCAACACCGAAATCTTGTTAAAGTTGTTGATAGATTTTCGAGTAAATTGTTAGATTGGTCTACACGTTTTAACATTCTATTTGGAATTGCTCGGGGCCTTCTTTATCTTCATCAAGATTCAAGATTAAGGATCATACACAGAGATCTAAAAGTCAGTAATATTTTATTAGACAGTGATATGAACCCAAAAATTTCAGATTTTGGCTTAGCTAGAATGTGTGGAGGTGATCAAATCGAGGGGAGAACAAACAGAATAGTTGGCACATACGGTTATATGGCACCAGAATATGCCACTGATGGATTATTTTCTATAAAATCAGATGTATTTAGCTTTGGCGTATTATTGTTAGAAATTATAAGTGGAAAGAAAAACAGGGCACTTAGCTATCAAGAAAACGATCATAATCTTATTGGATATGCATGGAGATTGTGGAAAGAGAGAACTCCACTCAAATTGATCGATGATTACTTAAGGGACTCGTGCATTGAATCTGAAGCATTGCGTTGCATTCAAATTGGTCTATTATGTCTACAACAACATCCTGACGATAGACCAAACATGACATCTGTAATTGTGATGTTAAGTAGTGAAGACATTTTACCTAAACCAAAAGAACCTGGTTTCTTAATTAAAAATTTCTCAAGCAAAGGAGAGCCTTCTTCTGAAAGACAGACATCTTCTACAAATGAAGTAACTATATCACTAATAGGCCCTAGATAA 2385 0.3656 MTLLPTMLVITKLLLFFSKISIAIDTITQSQPLYDSNTLVSKDGTFELGFFNPGNSNNRYVGIWYKNIPVRRVVWVANRDNPIKDTSSKLIISQDGNLVLLNQNQSLLWSTTNTTTTTRKVLISSPIVQLLDNGNLVLKNDGEEIFVWQSFDYPCDTILPGMKTGWDKKRGLERRLTAWKNWDDPSLGELTSAMVLTPNPESFMWKGSTKFYRTAPWTGPRSSGIIGFKENPLFNFEFVNNEDEVYYMFTLKNSSVVSIIVFNETVSLRQRLIWIPESKIWKIYQILPQDSCDTYNVCGENGQCVLDASPMCQCLDGFKAKSPQQWNAMDWTGGCVRNGNWSCGDKNKDGFKKIVGMKMPDTTHSWIDEKMTLEDCKVRCLQNCSCTAYSSLDSTGTNNGCSIWFGDLLDLRVSPSGKDLYVRMDASYIGDKNGHTKAVVLSVSITISVVLVILAFTYIYITKAKYKEKIEKITRSEENDEETHEDFELPIFDQATIRKATNNFSYDNKLGEGGFGPVYKGTLLDGQEIAVKRLSKSSGQGQKEFKNEVILCAKLQHRNLVKVVDRFSSKLLDWSTRFNILFGIARGLLYLHQDSRLRIIHRDLKVSNILLDSDMNPKISDFGLARMCGGDQIEGRTNRIVGTYGYMAPEYATDGLFSIKSDVFSFGVLLLEIISGKKNRALSYQENDHNLIGYAWRLWKERTPLKLIDDYLRDSCIESEALRCIQIGLLCLQQHPDDRPNMTSVIVMLSSEDILPKPKEPGFLIKNFSSKGEPSSERQTSSTNEVTISLIGPR 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo49g00012 794 Pfam S-locus glycoprotein domain 212 321 IPR000858 GO:0048544
Mepo49g00012 794 Pfam PAN-like domain 343 411 IPR003609 -
Mepo49g00012 794 MobiDBLite consensus disorder prediction 769 794 - -
Mepo49g00012 794 SMART ntp_6 346 424 IPR003609 -
Mepo49g00012 794 PIRSF SRK 563 794 IPR024171 GO:0004674
Mepo49g00012 794 PIRSF SRK 1 565 IPR024171 GO:0004674
Mepo49g00012 794 Pfam Protein tyrosine and serine/threonine kinase 571 747 IPR001245 GO:0004672|GO:0006468
Mepo49g00012 794 Coils Coil 463 483 - -
Mepo49g00012 794 CDD EGF_CA 290 318 - -
Mepo49g00012 794 CDD B_lectin 30 154 IPR001480 -
Mepo49g00012 794 Gene3D - 18 151 IPR036426 -
Mepo49g00012 794 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Mepo49g00012 794 Pfam Protein kinase domain 506 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo49g00012 794 ProSiteProfiles Bulb-type lectin domain profile. 24 151 IPR001480 -
Mepo49g00012 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Mepo49g00012 794 Pfam Domain of unknown function (DUF3403) 752 794 IPR021820 GO:0004674
Mepo49g00012 794 MobiDBLite consensus disorder prediction 767 794 - -
Mepo49g00012 794 CDD PAN_AP_plant 342 423 - -
Mepo49g00012 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 151 - -
Mepo49g00012 794 Gene3D Phosphorylase Kinase; domain 1 463 563 - -
Mepo49g00012 794 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 555 757 - -
Mepo49g00012 794 Gene3D Hepatocyte Growth Factor 343 418 - -
Mepo49g00012 794 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 185 IPR036426 -
Mepo49g00012 794 ProSiteProfiles Protein kinase domain profile. 504 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo49g00012 794 SMART serkin_6 504 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo49g00012 794 SMART blect_4 30 154 IPR001480 -
Mepo49g00012 794 Pfam D-mannose binding lectin 73 180 IPR001480 -
Mepo49g00012 794 ProSiteProfiles PAN/Apple domain profile. 343 426 IPR003609 -
Mepo49g00012 794 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 740 - -
Mepo49g00012 794 SUPERFAMILY Protein kinase-like (PK-like) 486 749 IPR011009 -
Mepo49g00012 794 Gene3D Transferase(Phosphotransferase) domain 1 564 752 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo49g00012 432 767 Receptor kinase-like Gene Family AT4G23230 49.036 5.34e-110 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo49g00012 PK_Tyr_Ser-Thr 3.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo49g00012 - - tpra:123915292 1278.08