Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo41g00019 ATGTCCTTGTTAACTGTGGCTCATCAAAGAGGTTCAGGGGAGTTCACCGGGTACACGGTGAAGCGCGAAGGCGACGATCATAACGACGGTGGTGGTACCGACGACGGTGGAAGTTCTAATGCATCACAATCATTAGATTTCAACCAAATGGTTTCAGGGTATAATGGTGATAGAGAGTTATCAGAAATGGTTTCAGCTCTTACACATGTTGCATCATCAGGGTCTAATCAAATGAGTAGTAATGAATGGATTCAAAGAAGTGGGTTTCCTTTGATATCAAGCTTTGGAAATGCTTCATCTTCTTCTTATTCTTCTTCAAGTTCTAGCTTTGTTTTGAATTCTGGATCATGGAGTGGTCAAAAAAGAGGGCGTGATGAAGAAAGTAGTGGTTCTTCTAATCAGTATATAACACAAGCTGTTGTTCCTCCTAGACTCTTTAGAACTGTTATGGTACCTTCTCAAGAATCATCATCCTCACCATCAGTATCATCAGTAACCGAAGAAGCTCGCACAAGTACTACCATAGCCACCTCGGCAGCATCAGCCGCGTCATTCGAAGACTCCGGCGAGCGAAGAAGACGATACAGAGGAGTGAGACAAAGACCATGGGGAAAATGGGCAGCAGAAATAAGAGATCCACACAAAGCACAAAGAGTATGGCTTGGAACATTTGACACAGCAGAAGCTGCAGCTAGGGCTTATGATGACGCTGCATTGGGATTCAGAGGAAGCAGAGCAAAACTCAACTTCCCTGAAAATGTTAGATCAATTATGCCGCCGCCACCACAACAACAACCACAACTTCAGTCTTTTCCGGCCACTGCGGTTCCTTCTGGAACACCGCAGCGGCCGGTTCAAGGAACCTCTGACATGATCAGAGACTATTTGGAATATTCTCATATTCTTCAAAGTTCTGGTGATTTTCAACTACAACAAATGCAGCAGCAGCAACAATTACAAGCTTCTAATTTGGTTCAACAATGGTATTATAATTCACAAATGGCTGCACTACAATCACATTCATTGTTATCTTCTTCATCTTCATCACTTTCTATGAATTCTAATATGTTACCATCAACACCTTCATTTTCACCTTCCACTCAACTTTCATCCTCCTCTGCTTCATTTCCCCTGTTTTCTAGTCAACAAATGGGATTTTTCCAGCCACCGGAAAACCGACCGCCTGGTGGTAGCCGTGGCGGCGGAACAGAGTTACCGCAGTCAACATGGTCAAATACTAGTGGCCATCCGCCACCACCTTATGGTTGA 1269 0.4389 MSLLTVAHQRGSGEFTGYTVKREGDDHNDGGGTDDGGSSNASQSLDFNQMVSGYNGDRELSEMVSALTHVASSGSNQMSSNEWIQRSGFPLISSFGNASSSSYSSSSSSFVLNSGSWSGQKRGRDEESSGSSNQYITQAVVPPRLFRTVMVPSQESSSSPSVSSVTEEARTSTTIATSAASAASFEDSGERRRRYRGVRQRPWGKWAAEIRDPHKAQRVWLGTFDTAEAAARAYDDAALGFRGSRAKLNFPENVRSIMPPPPQQQPQLQSFPATAVPSGTPQRPVQGTSDMIRDYLEYSHILQSSGDFQLQQMQQQQQLQASNLVQQWYYNSQMAALQSHSLLSSSSSSLSMNSNMLPSTPSFSPSTQLSSSSASFPLFSSQQMGFFQPPENRPPGGSRGGGTELPQSTWSNTSGHPPPPYG 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo41g00019 422 FunFam Ethylene-responsive transcription factor 2 193 252 - -
Mepo41g00019 422 MobiDBLite consensus disorder prediction 152 184 - -
Mepo41g00019 422 MobiDBLite consensus disorder prediction 114 136 - -
Mepo41g00019 422 MobiDBLite consensus disorder prediction 261 287 - -
Mepo41g00019 422 Gene3D AP2/ERF domain 193 253 IPR036955 GO:0003700|GO:0006355
Mepo41g00019 422 ProSiteProfiles AP2/ERF domain profile. 194 251 IPR001471 GO:0003700|GO:0006355
Mepo41g00019 422 SUPERFAMILY DNA-binding domain 194 252 IPR016177 GO:0003677
Mepo41g00019 422 MobiDBLite consensus disorder prediction 14 45 - -
Mepo41g00019 422 PANTHER DNA-BINDING DOMAIN 142 327 IPR044808 GO:0003700|GO:0009873
Mepo41g00019 422 Pfam AP2 domain 194 243 IPR001471 GO:0003700|GO:0006355
Mepo41g00019 422 MobiDBLite consensus disorder prediction 268 287 - -
Mepo41g00019 422 CDD AP2 202 253 IPR001471 GO:0003700|GO:0006355
Mepo41g00019 422 PRINTS Ethylene responsive element binding protein signature 195 206 IPR001471 GO:0003700|GO:0006355
Mepo41g00019 422 PRINTS Ethylene responsive element binding protein signature 217 233 IPR001471 GO:0003700|GO:0006355
Mepo41g00019 422 MobiDBLite consensus disorder prediction 152 196 - -
Mepo41g00019 422 MobiDBLite consensus disorder prediction 345 388 - -
Mepo41g00019 422 MobiDBLite consensus disorder prediction 345 422 - -
Mepo41g00019 422 MobiDBLite consensus disorder prediction 402 416 - -
Mepo41g00019 422 SMART rav1_2 194 257 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo41g00019 148 255 AP2-EREBP Transcription Factor Family AT5G61890 56.364 2.27e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo41g00019 AP2 1.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo41g00019 - - psat:127127635 437.958