Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08050 ATGAAAGTGCCTAGCCCGACTCGGAAGCAATCTGTTGGAGATCGTCACATGATCTCGCCTACTCGCCACAATATGTCTCGTTCCGCACGGAGGAGGAAGAACAGTGGTCATTGGTGGTTGTCATCAATATCATGGATGAAGAAAGAGGTTGACTCATATGACATGACTCATCACACTCACCTCTCTTCTGATAGTCCCTACTACAAGGGTCTCACCGATCAATCTCTTGCTATTCCTCACGAAGAATACCAAGAGGAGGACAACAACAATGTCTCTTCATCACTGCGACCTATCCTCCTTTCATCATCCCCCCACAGTAGTCCTTACTACAAAGGTCTTACCGATTATTCTCTTGTCATTGATGCCTCTTGGGCCACTCCTCATCCCCACCACCACCATCACAACTCATCCCTTTCTTGTTATCACGACTCAAGTCCATACTACAGGGGTCTTATTGCTCTTCCTGTTCCTACTTCCCCCTCCTCTCTCTTCTCCCTCAACATCAATTTCAATACCACCCCCACCACCCAACCACCAACTCATGATTTTGTTGTCTTTTTAAGTCCAGAAGATCAATCACTCATGGTAACAGAACCAGAAGCAACTTTGGAGGAGGCGATGGTGTTGATCCATCCCGATATCCAAGGGAAGCCTTTGAGGGTTAACAATCCGCCGTCATCACAAGCAACTTTGGAGGAGATGGACGACGGTGATGATGCTGAAGGCGGGAAGCCTTTGAGGGTTAATTATGAATCAGAAACTATTCCAGAGAAAACAATTTTGTGTGACGATGTTGTGTTGTTGGTTGAAGAGCATAAGAGAAAGCCTTTGAGGGAGAGAGTGACAACAAATTCAGAGACAGTATTGTCACAACAAGAAAATGCTGACAAAACAGATTTGGGTATGGAGGAGGAGATGGAATTGGTGATGATTGAACAAGAGAAGTCATTGAGAGAGAGTCGTGCATCACAAGTTGGGAATGAGAACGTACTAATAAATACAGAGACAACAGATTTGAAAGAGGAACTAAGAGACTTTTGGTTGGGTGGTCAAAAGACTGCTTCTGAACAAACAGTGTCATTGGAATTACCTTGTGAGCATAAGTTGAACACCGCTGAGGAAGGAAATATGTATGAGTATCTGTGGGCAACCAAATACCAGCCCAAGATATTGGCAGACTTCATCTGCAACAGAGATAAAGCACTTCAGCTGAAAGCATTGGTTAAAGGTGGGTGTGGCTGTAATCATTTTATATTTGAAGGACCCCCAAATGTAGGAAAGAGATCCATGATACGGGCTATGCTTCGGGAGGTATTTGGCGCTGACGGAGTGCAGGTCACGGAAGAATATAAAGACTTCAGCTTGAAGGGAGAAATGGTCGAAAATCTCAAACTGCGTGTGCAGAAATCACTCCATCATGTTGAGGTAAATCTCTCAGAAGCAAAGGGATATGAAAAGAATGTGATTGTTGAGTTATTCAAGGAAACATATGGTAAGGTGATCAATAGTTCACTGCCTTGTAGCCCAGAAAACTGTCAAGCAATAATTTTGTACGAGGCGGAGAAGCTATCGTTAGAATCGGTGTTGTATATAAAGTGGCTGGTAGAAAAGTATAAAGGGTGTAATAAGCTGTTCTTTTGTTGCTCTGATGAATCAAGGCTACAACCAATCCAATCATACTGCACCACTGTCCGCCTCTCATCACCATCAACCCATCAGATTGTCAAGATTTTGGAATATATTGTACAAGAAGAAGGAATAAAATTATCACACGAGTCAATCAAGAGTATAGTTTTAAGGTCCAAAAACAATCTCCGTCAAGCCATTCGTTCATTGGAGGCCACTTACCGAAACAAGAATGCCCTCAACGAAGATGATTTAGTTTTAACTGGATGGGAGGATGATATTTTGAATATTGCTAGAAATATAATCAGAGAGCAGAGTCCTAGACAGTTGTACGCCATTCGAAAAAAGCTTCAAAGTCTTATGATTCATGATGTTCCTCCTGACTTTATTTACAAGTCTTTGGTTGCAAACTTGACCAGTCTAGTTGATCACTCACTATGCTCAGGGGTTACCAAACTTGGCAAGGAGTACACTAAAGGTAGTGAAATCAAATTTGAAGGCGTGAAGCATTATGCTCAAAACAAACAAGGAGGATCTGATGAAAAGAACAATAAACTAACAAAAAAGAATGCAATGAACTACTTAAAAGTTGAAGAATTTATAGCAAAATTCATGAGCTGGTACAAGAATTCGTCTAAAAGTAATGATCACGTGTAA 2283 0.4183 MKVPSPTRKQSVGDRHMISPTRHNMSRSARRRKNSGHWWLSSISWMKKEVDSYDMTHHTHLSSDSPYYKGLTDQSLAIPHEEYQEEDNNNVSSSLRPILLSSSPHSSPYYKGLTDYSLVIDASWATPHPHHHHHNSSLSCYHDSSPYYRGLIALPVPTSPSSLFSLNINFNTTPTTQPPTHDFVVFLSPEDQSLMVTEPEATLEEAMVLIHPDIQGKPLRVNNPPSSQATLEEMDDGDDAEGGKPLRVNYESETIPEKTILCDDVVLLVEEHKRKPLRERVTTNSETVLSQQENADKTDLGMEEEMELVMIEQEKSLRESRASQVGNENVLINTETTDLKEELRDFWLGGQKTASEQTVSLELPCEHKLNTAEEGNMYEYLWATKYQPKILADFICNRDKALQLKALVKGGCGCNHFIFEGPPNVGKRSMIRAMLREVFGADGVQVTEEYKDFSLKGEMVENLKLRVQKSLHHVEVNLSEAKGYEKNVIVELFKETYGKVINSSLPCSPENCQAIILYEAEKLSLESVLYIKWLVEKYKGCNKLFFCCSDESRLQPIQSYCTTVRLSSPSTHQIVKILEYIVQEEGIKLSHESIKSIVLRSKNNLRQAIRSLEATYRNKNALNEDDLVLTGWEDDILNIARNIIREQSPRQLYAIRKKLQSLMIHDVPPDFIYKSLVANLTSLVDHSLCSGVTKLGKEYTKGSEIKFEGVKHYAQNKQGGSDEKNNKLTKKNAMNYLKVEEFIAKFMSWYKNSSKSNDHV 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08050 760 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 382 680 - -
Mepo3g08050 760 Gene3D - 631 750 - -
Mepo3g08050 760 MobiDBLite consensus disorder prediction 217 245 - -
Mepo3g08050 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 378 627 IPR027417 -
Mepo3g08050 760 CDD HLD_clamp_RFC 569 627 - -
Mepo3g08050 760 MobiDBLite consensus disorder prediction 1 30 - -
Mepo3g08050 760 SUPERFAMILY post-AAA+ oligomerization domain-like 631 699 IPR008921 GO:0003677|GO:0006260
Mepo3g08050 760 Coils Coil 602 625 - -
Mepo3g08050 760 Gene3D - 380 569 IPR027417 -
Mepo3g08050 760 Gene3D - 570 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08050 Mepo-Chr3 93301842 93307118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g08050 381 752 Core DNA Replication Machinery Family AT5G27740 31.830 5.80e-48 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08050 K10756 - gmx:102664389 647.121