Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08048 ATGGTGGTGGTTGCGCAAGGTGTTTGTGGTAAAGCCTTACTGTTTAGCATCGGAGTTGGAGTGAGACCTAAACCCACCACTAAACACTCTGTCTTCTTTTTCGTTTCTTCTAATTCCAGTTCTAATTCTAATTCTAATTCCAATCCCACCGTCGATAAAACCACGAGTTTCGGAAGACTAAAAGTTCAGAAAGTTAATGCTCTTATCCACAGAACCAAGCAAAACACCACAAAACGCAAACTGCAACTACTACAACTAGAAGATGAAGATGAAGACAACAGTTCTGCAACTGCAACAACACCACCACCACCACCACCACCACGACAACAACAACAACACACTCATTCGAGAGTTGGATGGGGAGATAATAGGATTAGCAGTCAATCATTGGCGCTGGCATCTGAGGAAACCAACTTTTTCAGTCTAAAATCATTTAAAGACATTGGATGCGCCGATTTCATGATTGAATCACTCCATAACCTCTCTTTAACTCGCCCTTCCAACATACAGGCCATGTCATTTGCTCCTGTTATTGCCGGTAAGTCTTGTATCATTGCTGACCAGAGCGGTTCTGGTAAGACATTAGCTTATCTTTTACCAATCATTCAACGTCTCAGACAACAAGAACTACAAGGACTTCATAAATCATCTTCACAATCTCCTACTCTTCTTATACTCGCACCCACCGCTGAGTTAGCTTCTCAGGTCTTCCATAATTGTCGTTCAATCTCTAAATCTGGTCGGGTTCCATTCAAATCTATGCTTGTCACTGGTGGCTTCCGACAAAAAACTCAACTCGATACTTTAAACCAGGGCGTTGATGTTTTAATTGCTACACCTGGCCGTTTTCTCTTCCTCATCAACCAAGGCTTCTTGCACTTAACAAATCTAACATGTGCTGTGTTGGATGAGGTTGATATACTCTTTTCCGATGAGGACTTCGAAAAGGCTCTTCAATGCTTGATTAGTTCTTCACCTGTGGACACACAATATTTATTTGTAACTGCTACTTTACCTAAAAATGTTTACAGCAAACTGGTTGAAGTTTTTCCTGATTGTGAAATGGTCATGGGACCTAGTATGCATCGAATAAGCTCTCGCCTTGAAGAGATAATAGTAGATTGTAGTGGGGAAGATGGACAGGAAAAAACTCTCGACACAGCATTTTTTAACAAGAAAGCTGCTCTTCTGCAGCTTGCGGAGAAGAATCGTGTCCCAAGAACTATTGTGTTCTGCAACAAAATTGAAACATGCAGAAAAGTTGAAAATGCATTAAACCGTTTTGATAGAAAGGGGATTCGCATGCAAGTTCTACCTTTCCATGCTGCCATGACACAAGAATCACGGCTTGCTAGTATGAAAGAGTTTACACGTTCTCCACCAAAAGAAGTGTCCCAGTTTATGGTTTGCACAGACAGAGCTTCGCGGGGAATTGACTTCGCTAGAGTGGATCATGTAATACTTTTTGACTACCCACGTGATCCAAGTGAATACGTGCGACGTGTTGGAAGAACAGCCAGAGGTGCCAGGGGTCAGGGCAAAGCGTTTATCTTTGTAGTTGGAAAGCAAGTATCCCTTGCACGAAAAGTAATGGAAAGAAATCGGAAGGGTCATCCACTGCATGATGTACCTTCGGCTTATGAGTATTGA 1650 0.4212 MVVVAQGVCGKALLFSIGVGVRPKPTTKHSVFFFVSSNSSSNSNSNSNPTVDKTTSFGRLKVQKVNALIHRTKQNTTKRKLQLLQLEDEDEDNSSATATTPPPPPPPRQQQQHTHSRVGWGDNRISSQSLALASEETNFFSLKSFKDIGCADFMIESLHNLSLTRPSNIQAMSFAPVIAGKSCIIADQSGSGKTLAYLLPIIQRLRQQELQGLHKSSSQSPTLLILAPTAELASQVFHNCRSISKSGRVPFKSMLVTGGFRQKTQLDTLNQGVDVLIATPGRFLFLINQGFLHLTNLTCAVLDEVDILFSDEDFEKALQCLISSSPVDTQYLFVTATLPKNVYSKLVEVFPDCEMVMGPSMHRISSRLEEIIVDCSGEDGQEKTLDTAFFNKKAALLQLAEKNRVPRTIVFCNKIETCRKVENALNRFDRKGIRMQVLPFHAAMTQESRLASMKEFTRSPPKEVSQFMVCTDRASRGIDFARVDHVILFDYPRDPSEYVRRVGRTARGARGQGKAFIFVVGKQVSLARKVMERNRKGHPLHDVPSAYEY 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08048 549 MobiDBLite consensus disorder prediction 88 121 - -
Mepo3g08048 549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 520 IPR027417 -
Mepo3g08048 549 Gene3D - 107 356 IPR027417 -
Mepo3g08048 549 SMART helicmild6 419 509 IPR001650 -
Mepo3g08048 549 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 391 549 IPR001650 -
Mepo3g08048 549 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 46 547 - -
Mepo3g08048 549 CDD SF2_C_DEAD 368 519 - -
Mepo3g08048 549 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 174 356 IPR014001 -
Mepo3g08048 549 Pfam Helicase conserved C-terminal domain 392 508 IPR001650 -
Mepo3g08048 549 CDD DEADc 154 342 - -
Mepo3g08048 549 Gene3D - 362 542 IPR027417 -
Mepo3g08048 549 SMART ultradead3 162 371 IPR014001 -
Mepo3g08048 549 Pfam DEAD/DEAH box helicase 168 342 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08048 Mepo-Chr3 93283661 93286415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g08048 142 530 Eukaryotic Initiation Factors Gene Family AT3G19760 27.506 9.65e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08048 K13179 - gmx:100780849 696.041