Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08039 ATGTCTAAAGAAGTGAGCGAAGAAGGGCACCTACCACATCCTCACGGTAAGGACTACGTAGACCCACCACCAGCACCCCTCCTTGACTTCGCTGAGATTAAGCTCTGGTCTTTCTACAGAGCTCTCATCGCTGAGTTCATAGCCACCCTTCTCTTCCTCTACGTCACCGTCGCCACTGTCATTGGTCACCAAAAACAAACTGGTCCATGTGACGGTGTTGGCCTTTTAGGCATAGCATGGTCCTTTGGTGGCATGATATTTGTCCTTGTCTACTGCACCGCCGGCATCTCCGGTGGCCATATTAACCCTGCGGTCACATTCGGCCTTTTCTTGGCTCGTAAAGTGTCTCTGATAAGAGCGGTGTTATACATGGTAGCACAATGTTTAGGTGCTATCTGTGGCGTTGGGTTGGTGAAGACTTTCATGAAACACCCTTACAACCACCTCGGTGGCGGTGCTAACTCTGTAGCTTCCGGTTACAGCAAAGGCTCTGCCCTCGGTGCTGAAATGATCGGAACATTTGTGTTGGTTTACACAGTTTTCTCTGCTACTGATCCCAAGAGAAGCGCACGTGACTCACATGTCCCTGTTTTGGCTCCTTTGCCCATTGGTTTTGCTGTTTTCATGGTTCACCTTGCAACTATACCAATCACCGGTACCGGAATCAACCCTGCTAGGAGCTTCGGTGCTGCTGTTATCTTCAACAATGCCAAAGTTTGGGATGACCATTGGATCTTCTGGGTTGGACCGTTCGTGGGAGCGTTGGCAGCGGCTGCATACCATCAATACATTCTTAGAGCGGCGGCTATCAAGGCGTTGGGCTCCTTTAGAAGCAACCCCACCAACTAA 849 0.5029 MSKEVSEEGHLPHPHGKDYVDPPPAPLLDFAEIKLWSFYRALIAEFIATLLFLYVTVATVIGHQKQTGPCDGVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGLVKTFMKHPYNHLGGGANSVASGYSKGSALGAEMIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNNAKVWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08039 282 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 9 271 IPR034294 -
Mepo3g08039 282 Pfam Major intrinsic protein 33 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g08039 282 NCBIfam MIP family channel protein 44 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g08039 282 SUPERFAMILY Aquaporin-like 32 266 IPR023271 -
Mepo3g08039 282 Gene3D Glycerol uptake facilitator protein. 25 282 IPR023271 -
Mepo3g08039 282 ProSitePatterns MIP family signature. 100 108 IPR022357 -
Mepo3g08039 282 FunFam Probable aquaporin PIP1-2 25 280 - -
Mepo3g08039 282 CDD MIP 40 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g08039 282 PRINTS Major intrinsic protein family signature 204 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g08039 282 PRINTS Major intrinsic protein family signature 119 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g08039 282 PRINTS Major intrinsic protein family signature 244 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g08039 282 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g08039 282 PRINTS Major intrinsic protein family signature 82 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo3g08039 282 PRINTS Major intrinsic protein family signature 168 186 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08039 Mepo-Chr3 93226139 93227475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g08039 1 282 Major Intrinsic Protein MIP AT4G35100 89.007 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08039 K09872 - thj:104819653 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g08039 3 93226139 93227475 Mepo3g08039 3 93226139 93227475 ECH