Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08035 ATGAATATGATTATGCTAGGTGGCATTATAGAGGATCCAAGACCGAGTCTTATCAGTATGGTGGTCCAGTCTGCATTTGGCACTGACCACTCGGAGAATGAGAATGAGAAATCGAAAAGCCAAGAAGATAACAGAAAGTGGGAGGAAGAAACATTTAAAGAAGAGATGAAAGTGTCATCAAGATTATCAACATCACAGAAGCTTGGTTGGCCACTTCTCCGCAGGATGCATACAGAAATCTCAAGGGACATGTCTGTTGTACAATGGGTAATGAACTTACCGGATCGCTCAACACACAAATATAATAACAATCGACACAGTTCATCTCAAATTGAGGGCCAGAGCTATAAAAATGTTATTAGTTTCAGTAGCTGCAAGTGGTTTATCTTTGAGGTTCTCAACTCTTGCACTAGTCAATTCTCTTCAGAAAATGTGATTGGAATTGGAGGGAGCAATCGCGTGTACAGAGGAACCCTCCCCGATGGGAAGCCGGTGGCAATCAAAGTTATGCAGTCATCAAAAGAAGCTTGCAAAGATTTTGCACTTGAAGTTGAAATAATGTCCTCATTGAACCACCCACACATCGCTCCTTTGCTAGGGATTTGCATTAGAGATGAAACTTTGATATCTGTTTACGATTATTTCCCCCAGGGAACCTTAGACCAAAATCTACGCGGTAAGAACAAGGATGAATCTATGTTAACATGGGAAGACAGATTTAAGGTAGCTGTTGGGATTGGTGAAGCACTGAATTACCTGCACAAGCACAATCAAACCTCCAAGCCTATTATACATAGAGACGTCAAGTCTTCCAACATTCTTCTTTCCGAAGGGTTTGAGCCACATTTATCTGATTTTGGACTTGCCATGTGGGGACCAACAACTTCATCTTTTGTGATACAAGACGATGTAGTTGGGACTTTTGGTTATCTTGCACCTGAATACTTCATGTATGGAAAGGTCAGTGACAAGATAGATGTTTATGCCTTTGGTGTGGTGCTACTTGAACTTATATCAGGAAGGGAACCAATTGACTCCAAAACTTGTGAAGGACACGAAATCAGTTTGGTCACATGGGCAAAACCAATTTTAGAGAGTGGGGATGTTAAAAGCTTATTGGATCCAAAGTTGCAAGGAAAATTTGATGTAGCACAAATGCACAGAATGGTTCTTGCAGCATCTCTGTGCATTACACGAGCTGCACGACTTCGTCCTAATATGAATCAGATACTGAAGATCTTAAACGGATGTGATGAGAAAGTCGAAAACATGTTTAAATCTCAGGAGAGTGATCATGATCATTCTGAAAATCTTGATGATGAAGTCTATCCAAATTCAAGTGCAGAATTGCACCTTAGCCTTGCATTACTTGATGTTGACAATGATACTGCATCATCGTATAGTAGTATCAGCATTAATGAATATTTGAAAGAACATTGGAGCCGATCATCTAGTTTCAATTAG 1464 0.4016 MNMIMLGGIIEDPRPSLISMVVQSAFGTDHSENENEKSKSQEDNRKWEEETFKEEMKVSSRLSTSQKLGWPLLRRMHTEISRDMSVVQWVMNLPDRSTHKYNNNRHSSSQIEGQSYKNVISFSSCKWFIFEVLNSCTSQFSSENVIGIGGSNRVYRGTLPDGKPVAIKVMQSSKEACKDFALEVEIMSSLNHPHIAPLLGICIRDETLISVYDYFPQGTLDQNLRGKNKDESMLTWEDRFKVAVGIGEALNYLHKHNQTSKPIIHRDVKSSNILLSEGFEPHLSDFGLAMWGPTTSSFVIQDDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPIDSKTCEGHEISLVTWAKPILESGDVKSLLDPKLQGKFDVAQMHRMVLAASLCITRAARLRPNMNQILKILNGCDEKVENMFKSQESDHDHSENLDDEVYPNSSAELHLSLALLDVDNDTASSYSSISINEYLKEHWSRSSSFN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08035 487 Pfam Protein kinase domain 141 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g08035 487 MobiDBLite consensus disorder prediction 27 46 - -
Mepo3g08035 487 FunFam Putative receptor-like serine/threonine-protein kinase 215 431 - -
Mepo3g08035 487 Gene3D Transferase(Phosphotransferase) domain 1 215 443 - -
Mepo3g08035 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Mepo3g08035 487 SMART serkin_6 140 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g08035 487 PANTHER OS08G0249100 PROTEIN 34 437 IPR046958 -
Mepo3g08035 487 ProSiteProfiles Protein kinase domain profile. 140 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g08035 487 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 111 214 - -
Mepo3g08035 487 Gene3D Phosphorylase Kinase; domain 1 98 214 - -
Mepo3g08035 487 SUPERFAMILY Protein kinase-like (PK-like) 118 414 IPR011009 -
Mepo3g08035 487 MobiDBLite consensus disorder prediction 30 46 - -
Mepo3g08035 487 Coils Coil 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08035 Mepo-Chr3 93196842 93198826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g08035 127 422 Trihelix Transcription Factor Family AT5G38560 41.722 1.88e-71 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mepo3g08035 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08035 - - tpra:123897148 776.163