Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08031 ATGGGAAGGTCCCCTTGCTGTGAGAAAGGTCTCATAAACAAAGGAGCATGGAGCAAAGAAGAAGATGAGCGGCTGATAGCTTATATTAGAGCTCACGGTGAGGGATGCTGGCGCTCTCTCCCAAAAGCCGCTGGTCTTCTCCGTTGCGGTAAGAGTTGCCGTCTCCGGTGGATCAACTATCTCCGCCCCGACCTCAAACGTGGAAATTTCACCCAACAAGAAGATCAACTCATCATCAAACTCCACACTCTCCTCGGTAACAAGTGGTCTATGATAGCCGGAAGATTGGCCGGAAGAACAGATAATGAGATAAAAAATTATTGGAATACACATTTAAGAAAGAAGCTTTTGAGCAAAGGAATTGACCCAGCAACTCACATGCCTCTCAACCAACCTTCTTCTGCTTCTGCCACCACAGCTCAAGTGGAAAGCTGCCCTGATTTGAATCTTGAACTAACCATTAGTCCTCCACATGATCACCCTCACCACCCATTCAGTTGTAGCACAAGCACTGCTGCTGCTTAA 525 0.4724 MGRSPCCEKGLINKGAWSKEEDERLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQQEDQLIIKLHTLLGNKWSMIAGRLAGRTDNEIKNYWNTHLRKKLLSKGIDPATHMPLNQPSSASATTAQVESCPDLNLELTISPPHDHPHHPFSCSTSTAAA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08031 174 Gene3D - 14 66 - -
Mepo3g08031 174 FunFam MYB transcription factor 68 129 - -
Mepo3g08031 174 CDD SANT 69 112 IPR001005 -
Mepo3g08031 174 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mepo3g08031 174 SMART sant 66 114 IPR001005 -
Mepo3g08031 174 SMART sant 13 63 IPR001005 -
Mepo3g08031 174 CDD SANT 16 61 IPR001005 -
Mepo3g08031 174 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 61 IPR017930 -
Mepo3g08031 174 Gene3D - 68 142 - -
Mepo3g08031 174 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mepo3g08031 174 FunFam MYB-related transcription factor 13 66 - -
Mepo3g08031 174 MobiDBLite consensus disorder prediction 150 174 - -
Mepo3g08031 174 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mepo3g08031 174 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mepo3g08031 174 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 139 - -
Mepo3g08031 174 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mepo3g08031 174 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08031 Mepo-Chr3 93160437 93162902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g08031 1 166 MYB Transcription Factor Family AT4G38620 70.000 1.18e-85 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g08031 Myb_DNA-binding 2.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08031 K09422 - gmx:778031 278.87