Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08029 ATGGAAAGGTTAGGGTGGTGTTTGGAATTCGTTCTTCGACATTCAAGTTTAGAGAGTGAGCATGTTAAGGAACTGGTTAAACTAAGCTCAGTCACCGAAATCGATAATCGGAAGATGAAAATGCTTCTGTTGAATTTCCTTGAAGACGAGTTGTTGTCCAAAGCATCTACTCCTGAATGGATGCTTGAAATTCTCGAGGTATTCGAAAAACTACTTCTGCATGATTGGGACCCTTCAAACCCTAATCCTAACCCTATTAGCGATTCCATGAAATCTGCTTACCGCATCGTTGCTGTGGAATGTACCGTTAAGTACCTTGAAGCAGAAGCAGGTACATCTAACCCTAAACACTATCTTCAAGCAGTTGAAAGAATATGGAAACGTAGGTTTCAAAAGCTGGAGGGAAGTTATTTGTTAACTCCAGAATTGAGAGACTGGAAAAGGCTAATCGATGGTTCCCTTTTCAACCAACGATACATGCTCAAACTTGCTTCATTTTCTGAATCCAGAAGGACAGCCATTCAAGGTGTTCAACTCTTTTTGAAGGATGCTCGGAATAACCTTTTAGGCCCTTCCTTTCTTCACTCTGTTGCTGCTGCTACTTCTCAAAATCAATCCCATAATGAGTCTCCAATGGAACTCGACAAAGACAATAGAAGGCTTAAAGGCAAGGCTTCTACTACTGTTGTTCTTGAGGAAATGGCTACATCAACCAGCTGTAGCAAATTTGACTCTTTGCCTATTCATGAGGCCCCAAAGAATGGGGAATCACTTAGATGCAATTCTGTGGAGTTTGAAACATTTGTGAACGATCCCGTGCCCGATTCGATTTGTATGCCGGACATTGTAAGGTCTGATGTGGCAATTGAAGAAATGAATCAGGAGCCACAAATGGAAAACCAGAGTAAAGATGCAAACGTACCCAACCCACAAGCTTGCCTAAATATTAACAATGATGAGGCCAATCTTACGAAGGCAACTTCCCATCAAAGTGATGTTCATCATCCTAGCTTGATGAAACCAAATAGTTCTGCTCGTACTCACGAGGCAGGAACATCAAGGGGCACAAGTAGAATTCGTTTGCCTACTCCACCAGAGAGGAAGAAGCTTTCTCCGCTGAAGGAGTATGTACCAAAAAAAATTACAAAAAGGAGAAAGAAAAAAAAATGGAGTCAATGGGAAGTGGATAATCTAAAGACCGGAATTAAAGTAATTGGAGAAGGAAACTGGAAATCAATTCTTCGTTCTTATGAATTTGACGAAAGAACTGAAGTTGATTTGAAAGATAAGTGGAGAAATTTGAAGCGGTCTGGATGCCAATGA 1323 0.4089 MERLGWCLEFVLRHSSLESEHVKELVKLSSVTEIDNRKMKMLLLNFLEDELLSKASTPEWMLEILEVFEKLLLHDWDPSNPNPNPISDSMKSAYRIVAVECTVKYLEAEAGTSNPKHYLQAVERIWKRRFQKLEGSYLLTPELRDWKRLIDGSLFNQRYMLKLASFSESRRTAIQGVQLFLKDARNNLLGPSFLHSVAAATSQNQSHNESPMELDKDNRRLKGKASTTVVLEEMATSTSCSKFDSLPIHEAPKNGESLRCNSVEFETFVNDPVPDSICMPDIVRSDVAIEEMNQEPQMENQSKDANVPNPQACLNINNDEANLTKATSHQSDVHHPSLMKPNSSARTHEAGTSRGTSRIRLPTPPERKKLSPLKEYVPKKITKRRKKKKWSQWEVDNLKTGIKVIGEGNWKSILRSYEFDERTEVDLKDKWRNLKRSGCQ 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08029 440 Pfam Myb-like DNA-binding domain 387 435 IPR001005 -
Mepo3g08029 440 PANTHER MYB TRANSCRIPTION FACTOR 5 436 - -
Mepo3g08029 440 SMART sant 386 437 IPR001005 -
Mepo3g08029 440 Gene3D - 379 439 - -
Mepo3g08029 440 ProSiteProfiles Myb-like domain profile. 382 435 IPR001005 -
Mepo3g08029 440 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 382 439 IPR017930 -
Mepo3g08029 440 CDD SANT_TRF 390 436 - -
Mepo3g08029 440 MobiDBLite consensus disorder prediction 325 369 - -
Mepo3g08029 440 MobiDBLite consensus disorder prediction 325 359 - -
Mepo3g08029 440 SUPERFAMILY Homeodomain-like 384 435 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08029 Mepo-Chr3 93141647 93144376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g08029 86 434 Single Myb Histone (SMH) Gene Family AT1G15720 30.447 8.29e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo3g08029 Myb_DNA-binding 1.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08029 - K11111 mtr:11418218 619.772