Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08027 ATGTTCTCTGCTCGTACCAAAATGTCTAACCCCAACCCCAAAGTCTTCTTCGACATGACCGTTGGAGACGAACCGGTCGGACGTATAGTAATGGAACTTTACGCCGACACCACTCCTCTCACCGCGGATAACTTCCGTGCACTCTGCACCGGGGAGAAAGGACTCGGTAGCAGTGGCAAGCCTCTCCATTACAAAGGCTCTACCTTCCACCGAGTCATACCTGATTTCATGTGTCAAGGAGGTGACTTCACCGCCGGTAATGGTACCGGTGGAGAGTCCATCTACGGGTCCAAATTTGCCGACGAGAATTTCATCAAGACCCACACAGGTCCAGGTGTTCTTTCGATGGCGAATGCAGGACCCGGTACGAATGGATCACAGTTCTTTATATGCACGGCGAAGACGGAGTGGCTTGATGGGAAACATGTGGTTTTTGGTCAGGTGATTGAAGGAATGGAGGTGGTGAAGGAGATCGAGAAAGTTGGGTCCGGTTCGGGAAAAACATCAAAGACAGTGGTTATTGCTGACTGTGGCCAACTCTCTGATGATAATGATCTCAACCAACAACATATATAG 576 0.4983 MFSARTKMSNPNPKVFFDMTVGDEPVGRIVMELYADTTPLTADNFRALCTGEKGLGSSGKPLHYKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFADENFIKTHTGPGVLSMANAGPGTNGSQFFICTAKTEWLDGKHVVFGQVIEGMEVVKEIEKVGSGSGKTSKTVVIADCGQLSDDNDLNQQHI 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08027 191 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 16 178 IPR002130 GO:0000413|GO:0003755
Mepo3g08027 191 FunFam Peptidyl-prolyl cis-trans isomerase 8 181 - -
Mepo3g08027 191 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 14 180 - -
Mepo3g08027 191 Gene3D - 2 188 IPR029000 -
Mepo3g08027 191 PIRSF Peptidylpro_ismrse 2 185 IPR024936 GO:0003755
Mepo3g08027 191 SUPERFAMILY Cyclophilin-like 8 185 IPR029000 -
Mepo3g08027 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 33 48 IPR002130 GO:0000413|GO:0003755
Mepo3g08027 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 81 IPR002130 GO:0000413|GO:0003755
Mepo3g08027 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 127 139 IPR002130 GO:0000413|GO:0003755
Mepo3g08027 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 127 IPR002130 GO:0000413|GO:0003755
Mepo3g08027 191 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 140 155 IPR002130 GO:0000413|GO:0003755
Mepo3g08027 191 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 16 179 IPR002130 GO:0000413|GO:0003755
Mepo3g08027 191 CDD cyclophilin_ABH_like 13 178 - -
Mepo3g08027 191 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 64 81 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08027 Mepo-Chr3 93130199 93131144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g08027 10 161 U-box Gene Family AT5G67530 45.161 1.02e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08027 K01802 - gmx:106795232 317.39