Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08023 ATGATGCTAATTATTCACCGTGTATATCTTTCTGCTGCACTTAAGTTGATTTTGTTAATTACTACTCTTTGCACTTTATCAGAGTGCTATGACCCTTTGGATCCAAATGGGAACATTTCTGTAACATTTGACATTTACCAACGTATGGAAAATGGATATCTGGCAAGGGTGACTCTCGAAAACCATCATCAATATCGGCATGTAGATAAACCAGGGTGGAAACTAGGATGGACATGGGCTAATAAGGAGGTGATATGGTCAATGAGTGGTGCAATTGCAACTGATAGGGGTGATTGCTCATCTTACAGTGGTTCTCAGATGCCACATTCATGCAAGAAAGATCCAATCATAGTTGATATATCTCCAGATGTGTCACAAAACAGGTCGGACCATTGCTGTCGTGGTGGCCGCCTCTCTGCCCGAGCCATTGATTCTTTCAATTCATTGTCTTCATTTGAACTTGAAGTAAGAAACTTGGAGGAAAAAGAAAACTCACTTGGACAAGCACCTAATAATGTTACATTCATGGCCCCAGGTCCTGGTTACACTTGTAGCTCATTTGTGACTGCTGATCCCTCAGTGTCCTTAGATTTTGGAGGACAGAGACAAGTTCCAGTTCTCAGAACTTGGAAGTCAACATGTACGTACTCAAGTTTCTTAGCAAACAAGTCACCAGTATGCTGTGTTTCTTTCTCAACATTTTACAATCCAATCATCACACCATGCCGTAATTGCACTTGTGGTGGATGCAGGGAAGCAAATAAAAATTCACTGTCTTGCATAAGGCCAGGTGATCCTCTCGGAGGGTCAAATGATGAGAAAAATGTAATTGAATGTACCGACCACATGTGTCCAATTCGAGTCCATTGGCATTTCAAAAACAATTATATGAATCAATGGAGGATCAAGCTTACAATTTCTAACTACAACTTCAATAGAAACTACTCTAACTGGAATATGCTCGTTCAACATCCCGGTTTTAACCAAAAGGCAACAACTTACAGCTTCAATAGCACTAAACTTTCGACTCTTGGGATCCAAGATGGAGTTGCACTTTTCTGGGGGATAGATTACTACAACAATGAATTATTGCATTCTGAGAAGGACCGAGTTGGTTCTGTGACAACAGAGATACTATTGGAAAAAGATCAGAATTCCTTCACATTGCAAAACGGATGGACATTTCCAAGAAGAATATATTTCAACGGTGAAAACTGTGACATGCCTTTACCTGACACATTCCCTATGTTACCGAATGGTAGCTCCAGTTTAAGACCAACTTCCCATGTTTTTACTCTTTCATTAATTTATTTGTTACTTGTCCAATTAGTACTGCTGTAG 1341 0.399 MMLIIHRVYLSAALKLILLITTLCTLSECYDPLDPNGNISVTFDIYQRMENGYLARVTLENHHQYRHVDKPGWKLGWTWANKEVIWSMSGAIATDRGDCSSYSGSQMPHSCKKDPIIVDISPDVSQNRSDHCCRGGRLSARAIDSFNSLSSFELEVRNLEEKENSLGQAPNNVTFMAPGPGYTCSSFVTADPSVSLDFGGQRQVPVLRTWKSTCTYSSFLANKSPVCCVSFSTFYNPIITPCRNCTCGGCREANKNSLSCIRPGDPLGGSNDEKNVIECTDHMCPIRVHWHFKNNYMNQWRIKLTISNYNFNRNYSNWNMLVQHPGFNQKATTYSFNSTKLSTLGIQDGVALFWGIDYYNNELLHSEKDRVGSVTTEILLEKDQNSFTLQNGWTFPRRIYFNGENCDMPLPDTFPMLPNGSSSLRPTSHVFTLSLIYLLLVQLVLL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08023 446 PIRSF COBRA 1 446 IPR006918 GO:0010215|GO:0016020
Mepo3g08023 446 Coils Coil 149 169 - -
Mepo3g08023 446 PANTHER PROTEIN COBRA 18 431 IPR006918 GO:0010215|GO:0016020
Mepo3g08023 446 Pfam COBRA-like protein 53 217 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08023 Mepo-Chr3 93088406 93091165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g08023 28 445 COBRA Gene Family AT3G29810 45.863 1.12e-135 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08023 - - ccaj:109801855 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g08023 3 93088406 93091165 Mepo3g08023 3 93088406 93091165 ECH