Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08018 ATGGCAGCATCAAATCTCTCTACCCTCTCTTCCTCTTCCCTCACCAAACCTAAACTCTCTTTTTCTTCTTCTTCTTCTTCCTCTTTCAACCATTCAACCACCAACAATTGTTTTTTCCACAACAAAACTCTTCTCTCAAACTCAAACCCCAAAACCTCACTTTCTCACTCTCACAACTACAAAACACTTTCACGCACCAATAACAACCCTAACAACACATTCCCATTCACAAACATCGCCGCTAATGATGACGACGACGAAAAACCTCGTGAAGAATGCGGCGTTGTTGGTATCTACGGCGACCCAGAAGCCTCTCGTCTCTGTTACCTCGCTCTCCATGCACTTCAACACCGTGGTCAAGAAGGTGCTGGTATCGTTACCGTCAACGATAACAAAGTCCTTCAAACCATTACCGGCGTTGGCCTCGTTTCCGAAGTTTTCAACTACACAAAACTCCGTCAATTACCTGGAAACTTAGCCATTGGTCATGTCCGTTATTCAACTGCAGGGCAATCCATGCTCAAAAACGTTCAACCTTTTGTTGCAGGTTACCGTTTTGGTTCCGTTGGTGTTGCTCATAACGGTAACTTTGTCAATTACCGTTCCTTGAGAAATGAACTTGAAGAATCTGGTTCAATTTTTAACACTACTTCCGATACTGAAGTTTTGCTTCATCTTATTGCAACTTCAAATCATAGACCTTTTATAGCGAGAATTGTTGAAGCCTGTGAAAAAGTTAAAGGTGCTTATTCAATTGTGTTTGTTACTGAAGATAAACTTGTTGCTGTTAGAGATCCTTTCGGTTTCCGACCTTTGGTTATGGGAAGAAGAAGTAATGGTTCTGTTGTTTTTGCTTCAGAAACATGTGCACTTGATTTAATTGAAGCTACTTATGAAAGAGAGGTTTATCCTGGTGAAATTGTGGTTGTGGATAAAAGTGGTGTTCAATCTCATTGTCTTGTTTCTCGTCCAGAACCAAAACAATGTATTTTTGAACATATTTATTTTTCATTGCCCAATTCTGTTGTATTTGGGAAATCTGTTTATGAATCAAGAAGATTGTTTGGTGAAATATTGGCTACTGAGAGTCCAGTTGATTGTGATGTTGTTATAGCTGTTCCTGATTCTGGTGTTGTTGCTGCACTTGGTTATGCTGCAAAAGCTGGTGTTCCATTTCAACAGGGTTTGATTAGGTCACACTATGTTGGAAGAACTTTCATTGAACCATCACAGAAGATTAGAGATTTTGGTGTGAAGTTGAAGCTTTCGCCGGTTCGTGCTGTTCTTGAAGGGAAAAGGGTTGTGGTTGTTGATGATTCAATTGTGAGGGGAACAACATCATCTAAAATTGTGAGGTTGTTAAAAGAAGCTGGTGCTAAAGAAGTTCACATGAGGATTGCATGTCCACCAATTATTGGGTCTTGTTATTATGGTGTGGATACACCTAGCTCTGAAGAGTTGATATCTAATAGGATGAGTGTGGCTCAGATTAAGGAATTTATTGGTTGTGATTCACTTGCTTTTCTGCCAATGGATAGTTTGAAGAAGCTGTTGGGTGATGATTCTTCTAATTTCTGTTATGCTTGTTTCACTGGGAATTATCCTGTTGAACCTACTGAACTTAAAGTTAAGAAGAGGATTGGTGGTGATTCTGTGGATGGTGAATTGAATGGATCGGTTCCAGCTAGCCCAAATCAGAAAGAGATGAAGATTGTTGGAGTCTGA 1725 0.4 MAASNLSTLSSSSLTKPKLSFSSSSSSSFNHSTTNNCFFHNKTLLSNSNPKTSLSHSHNYKTLSRTNNNPNNTFPFTNIAANDDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNDNKVLQTITGVGLVSEVFNYTKLRQLPGNLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNFVNYRSLRNELEESGSIFNTTSDTEVLLHLIATSNHRPFIARIVEACEKVKGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGSVVFASETCALDLIEATYEREVYPGEIVVVDKSGVQSHCLVSRPEPKQCIFEHIYFSLPNSVVFGKSVYESRRLFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIACPPIIGSCYYGVDTPSSEELISNRMSVAQIKEFIGCDSLAFLPMDSLKKLLGDDSSNFCYACFTGNYPVEPTELKVKKRIGGDSVDGELNGSVPASPNQKEMKIVGV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08018 574 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 91 542 - -
Mepo3g08018 574 Pfam Phosphoribosyl transferase domain 351 464 IPR000836 -
Mepo3g08018 574 NCBIfam amidophosphoribosyltransferase 93 535 IPR005854 GO:0004044|GO:0009113
Mepo3g08018 574 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 93 329 IPR029055 -
Mepo3g08018 574 SUPERFAMILY PRTase-like 329 541 IPR029057 -
Mepo3g08018 574 Pfam Glutamine amidotransferase domain 172 291 IPR017932 -
Mepo3g08018 574 Hamap Amidophosphoribosyltransferase [purF]. 92 534 IPR005854 GO:0004044|GO:0009113
Mepo3g08018 574 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 93 535 IPR029055 -
Mepo3g08018 574 MobiDBLite consensus disorder prediction 1 31 - -
Mepo3g08018 574 Gene3D - 353 517 IPR029057 -
Mepo3g08018 574 MobiDBLite consensus disorder prediction 49 74 - -
Mepo3g08018 574 CDD PRTases_typeI 351 467 IPR000836 -
Mepo3g08018 574 CDD GPATase_N 93 344 IPR035584 -
Mepo3g08018 574 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 93 313 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g08018 Mepo-Chr3 93023606 93025739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g08018 82 559 PRT Gene Family AT2G16570 84.728 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08018 K00764 - gmx:100791919 843.958