Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g08017 ATGGAGGATGATTCTGGGAAGGGAAGTACTTTAGTGATTGATCAAACCACCGAACAACTGATCGCCAGATGCATAGCTCCTGTTAAGAAGGACTTCCTTCGTCCTCCTCCCGATCGAACTACTACTTCCTCCTCTGCTCCCGTTCTCACCAAAGAGAAGAAATCTAAACGCCAACTCAAACGCGAACGTCTTCAGGATAAAAAATCAACAAAAAACCTGTGTCCACAAATTGCCAAGTCAGGTGATGTTAATTCCTGTCCCTATCAAGAAAAGTGTCGTTTCAGCCATGATATTCAAGCATTCAAGGAACAGAAATTGGCTGATTTGGAGGGCGAATGCCCTTTTTTGAAATCTGAAGGGGCTTGCCCTTATGGATTATCGTGTAGATTTTTAAATACACACGAAGATGGCAAGCCTTTATCATCTTCTAATGGATTGAAGGAAAGGGGTGAAGTTAATTGTTTTAGCAAAGATGTTCAAAAGCTTTTATGGAAAAATAAGATGACTTTCCCCAAAACTGATGCCAAACTCAAAAGTCTTGGTCTCTTGAATAAGTCAAAAGGGAATGACATCAAAAATAAAGATGGTGGTGATAAATGTGTTCAGTCTGATGATAATGGTTCTTGTGCGGTTACATCTGAGTTGGAAAACAAAGACAATGGTGACAAACGCCATCAGTCTGATGATGACAGCTCTTGTGGGGTTCCTGCTGACTCAGATTCTAAGTTAGAACGCTCTGTAGAAGTTATAAAAGATGATGATGGCATTAAAAGAGAACTTGAACCTGATTTACCTTGTCCCCAAAAGAAAAGAAAAACCGCAGAAAATTGTGAAGATGAGGAGACAGTAAATGAAGGTGTGAGCGTTGATGACCAAATTGTGGACGAAAGCTACATAAGATCTGAACCAGAGGCAGGAACTGAAGTTATAACCCCAGAAACTGATCTAAGCTTGAAGTTACACTCACGTGAAAAGAAGCTTATTGATTTCAGGGAGAAGTTGTATCTTGCACCCTTGACCACTGTTGGAAATCTCCCTTTCCGGAGAGTTTGCAAAGTATTAGGAGCTGATATAACATGTGGTGAAATGGCAATGTGCACAAATCTTTTGGAGGGTCAAGCTTCAGAATGGGCATTGCTGAGACGCCATTCATCTGAAGATTTATTTGGTGTACAAATCTGTGGGGCACATCCAGATACTGTAGGGCGAGCTGTTGAACTAATAGAAAAGGAATGTATAGTAGATTTCATTGATATAAACATGGGTTGCCCTATTGACATTGTTGTGAATAAGGGTGCTGGATCAGCTCTTCTTACAAAACCAATGCGCATGCAAAGTGTTGTAGAAGTAGCTTCAGGCACAGTCGATATTCCAGTAACTATAAAGGTACGGACAGCATATTTTGAAGGGAGGAATCGTATCGACTCTCTGATAGCAAACTTTAGCTCTTGGGGAGCTAGTGCAGTGACAATACATGGCAGGTCACGGCAACAGCGCTATAGCAAGCCTGCTGACTGGGATTACGTATATCAGTGTACCCGGAAAGCCCCTAATAATTTGCAAGTAGTGGGGAATGGAGATGTTTTTTCATTTGTAGACTGGAACAACCACAAAACTGAATGCCCTGAACTTGCCACATGCTTGATTGCCCGTGGCGCACTTATTAAACCCTGGATATTCACAGAGATAAAGGAACAGCGACATTGGGACATCAGTTCTGGCGAGCGATTAAATATTTTCAAAGATTTTGTGCATTTTGGTCTTCAACATTGGGGTTCAGATACAAAAGGGGTGGAGACTACCAGGCGGTTCTTGCTGGAATGGCTTAGCTACACTTGTAGGTACATACCTGTTGGTCTTTTGGATGTGGTTCCACAACAAATAAATTGGCGTCCACCATCTTACTATGGGCGGGATGACCTTGAGACACTGATGGCCTCCGACTCTGCAGCTGACTGGGTGCGATTATCAGAGATGTTACTTGGCAAAGTTCCAGATGGCTTTACTTTTGCACCAAAGCATAAATCAAATGCTTACGATAGAGCTGAAAATGGTTAA 2058 0.4203 MEDDSGKGSTLVIDQTTEQLIARCIAPVKKDFLRPPPDRTTTSSSAPVLTKEKKSKRQLKRERLQDKKSTKNLCPQIAKSGDVNSCPYQEKCRFSHDIQAFKEQKLADLEGECPFLKSEGACPYGLSCRFLNTHEDGKPLSSSNGLKERGEVNCFSKDVQKLLWKNKMTFPKTDAKLKSLGLLNKSKGNDIKNKDGGDKCVQSDDNGSCAVTSELENKDNGDKRHQSDDDSSCGVPADSDSKLERSVEVIKDDDGIKRELEPDLPCPQKKRKTAENCEDEETVNEGVSVDDQIVDESYIRSEPEAGTEVITPETDLSLKLHSREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADITCGEMAMCTNLLEGQASEWALLRRHSSEDLFGVQICGAHPDTVGRAVELIEKECIVDFIDINMGCPIDIVVNKGAGSALLTKPMRMQSVVEVASGTVDIPVTIKVRTAYFEGRNRIDSLIANFSSWGASAVTIHGRSRQQRYSKPADWDYVYQCTRKAPNNLQVVGNGDVFSFVDWNNHKTECPELATCLIARGALIKPWIFTEIKEQRHWDISSGERLNIFKDFVHFGLQHWGSDTKGVETTRRFLLEWLSYTCRYIPVGLLDVVPQQINWRPPSYYGRDDLETLMASDSAADWVRLSEMLLGKVPDGFTFAPKHKSNAYDRAENG 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g08017 685 MobiDBLite consensus disorder prediction 216 231 - -
Mepo3g08017 685 Pfam Dihydrouridine synthase (Dus) 336 570 IPR035587 -
Mepo3g08017 685 Gene3D - 64 143 - -
Mepo3g08017 685 Gene3D Aldolase class I 328 571 IPR013785 -
Mepo3g08017 685 MobiDBLite consensus disorder prediction 254 281 - -
Mepo3g08017 685 CDD DUS_like_FMN 333 568 IPR035587 -
Mepo3g08017 685 ProSiteProfiles Zinc finger C3H1-type profile. 68 99 IPR000571 GO:0046872
Mepo3g08017 685 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 16 679 - -
Mepo3g08017 685 MobiDBLite consensus disorder prediction 254 279 - -
Mepo3g08017 685 ProSiteProfiles Zinc finger C3H1-type profile. 112 137 IPR000571 GO:0046872
Mepo3g08017 685 ProSitePatterns Uncharacterized protein family UPF0034 signature. 417 435 IPR018517 GO:0008033|GO:0017150|GO:0050660
Mepo3g08017 685 MobiDBLite consensus disorder prediction 31 72 - -
Mepo3g08017 685 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 64 144 - -
Mepo3g08017 685 MobiDBLite consensus disorder prediction 211 242 - -
Mepo3g08017 685 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 329 571 - -
Mepo3g08017 685 SUPERFAMILY FMN-linked oxidoreductases 333 646 - -
Mepo3g08017 685 SMART c3hfinal6 109 136 IPR000571 GO:0046872
Mepo3g08017 685 SMART c3hfinal6 69 98 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mepo3g08017 Dus 2.6e-49 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g08017 K05544 - gmx:100783494 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g08017 3 93016820 93021629 Mepo3g08017 3 93016820 93021629 ECH