Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07968 ATGGCCTCAAGTTCCCTTAGCAAACACAAGCCTTGTGATTCAATTTGGACTCCAAAACAAAACAAGTTGTTTGAAAAAGCACTTGCAAAATTTGATAAGGATACCCCTGACCGTTGGCAAAATGTAGCAAAAGCAGTTGGTGGTAAATCAGTTGAGGAAGTTAAGAGACACTATGAGCTACTCTTGGAGGATCTCAAACACATTGAGTCTGGTCATGTTCCTATTCCAAATTACAAATCCACGTGA 246 0.3984 MASSSLSKHKPCDSIWTPKQNKLFEKALAKFDKDTPDRWQNVAKAVGGKSVEEVKRHYELLLEDLKHIESGHVPIPNYKST 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07968 81 Gene3D - 12 75 - -
Mepo3g07968 81 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 80 IPR044636 GO:0003700
Mepo3g07968 81 CDD SANT 16 62 IPR001005 -
Mepo3g07968 81 Pfam Myb-like DNA-binding domain 16 59 IPR001005 -
Mepo3g07968 81 FunFam Transcription factor SRM1 8 75 - -
Mepo3g07968 81 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Mepo3g07968 81 ProSiteProfiles Myb-like domain profile. 16 62 IPR001005 -
Mepo3g07968 81 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Mepo3g07968 81 SMART sant 12 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07968 Mepo-Chr3 92578642 92579232 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo3g07968 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07968 - - aprc:113865826 150.214