Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07966 ATGGTGGATCCAAGAGGGATATTCTGGTTCTGGTTTGTGTTATTGCTTTTATTTCTGTCTTTTCATGGAACATTGGAACAGACTCAGCCATTAACTTCACCTTTGGAACGAGAATCACTTCTTCAACTAAGAACTTCTTTGGGTTTAAGAAGCAAAGAATGGCCAAGAAAACCAGACCCTTGTTTAATCTGGATTGGTATTACATGTCAGAATGGTCGTGTTGTTGGTATCAACATCTCGGGTTTTCGAAGAACAAGAATTGGTAGAAGAAACCCTCAATTTTCTGTTGATGCTTTAGCTAATTTTACTCTATTACAGTCTTTTAATGCCTCTGGTTTTTATCTTCCTGGTTCTATTCCTGATTTGTTTGGTGTTAGTCTCCGTTCGCTTCGCGTGCTTGATCTTCGCTCTTGCTCGATAATCGATGTCATTCCTAACACTATTGGGAATTTGACTAGTCTTACTGGTCTTTATCTTTCTGATAATAATCTTACTGGGAATGTTCCTGATAGTTTAGGTCAACTCTCGGCACTTTCAGTTCTTGATCTTTCGGGGAATTCTCTTACTGGCAATATACCGGAATCTTTTGGCTCTCTTGCAAATCTTTCTTCCCTTGACTTGTCTGGCAATTTTTTTTCTGGGTCTATTCCTTCGGGTATAGGGACTCTTTCTAGGTTACAATACTTGAACCTTTCAGGCAATGACCTGAATTCTTTGCCTGCACAATTGGGTGGTCTTACTAGCTTGGTTGACCTTGATCTTAGTGAGAATTCTTTTACTGGCGGTGTTCTTCCTGATTTGAGAGGGTTGAGAAACTTGCGGAGGATGTTACTTGGAAACAGCATGCTTAATGGACCATTGCCGGTGGACTTTTTTACTGTTTCATTGCAGTTGCAGACTGTAGTTCTGAGGAAAAACAATTTTACTGGTTCTTTGCCTGTTGAAATGTGGTCTCTGCCGAGGTTGACGTTCGTTGATGTGTCTTCCAATAGTTTCAGTGGTACACTTCCCAGTTCTAGTTCCTCTGCTGGTTCTACGGTTGCGGTGCTCAATATATCTCATAACTTGTTTTATGGAAATCTCACACCTGTGCTCAGAAGGTTCTCTTTTGTCGATCTTGCAAACAATTATTATGAGGGTAAGGTTTTGGATTTCATGCATAACGTATCAATAGATAGTAATTGCCTTCAGAACGCGACAAATCAGAAGTCAACGGTGGAATGTGCATCATTTTATGCAGAGAGGGGACTCAGTTTTGATAATTTTGGACAACCGAATACGACAAAAGCCACAGAAGGTTCTGGGAAGAGTAATAAAACTAAGATTATATTGGCGGCAGTCTTGGGTGGACTTGGTTTACTTGCAATTTTGGCGTTACTACTTGTACTGTTGATTCTGTGCACTCGTAAAAGGGGTAATTCAAGTCAAAGGGGAAACGGTGTGGGCCCTGCTCCTGCTGGAGGAAGTCCTCCGCCGCCTGGTGTATCGGTAAACCTTGCAAGTGTAGGTGACTCATTTACATATCATCAGTTGCTTCAGGCAACCGGAGATTTCAGTGATGCAAATCTCATAAAACATGGCCACACTGGGGATTTATTCAACGGTGTTTTGGAAAATGGGATCCCCGTCGTCATCAAAAGGGTCGACATGCGATCTACAAAAAAGGATGCTTTTCTGTCTGAATTGGACTTTTTTAACAAGGTTTCTCATCAAAGATTTGTTCCCTTATTAGGTCATTGCTTAGAAAATGAAAACGAGAAGTTCCTGGTATATAAACTTATGCCAAAAGGGGACTTGTCTAATTGCTTATTCTTCAAAAACACCACATCGGAAGATGGTACTTTGCAGTCGTTGGACTGGATAACTAGGTTAAAGATTGCTACTGGAGCAGCAGAGGCCGTATCATATCTTCATCATGAATGTATTCCACCTATTGTTCACAGAGATATTCAAGCGAGCAGCATACTTCTCGATGACAGATATGAAGTTCGGTTAGGGAGTCTAAGTGAAGCCTGTGGTCAAGAAGGTGATGCCCATCAAAGTAAAATCACCCGGTTTCTGCGATTGCCTCAGTCCTCTGAACAAGGCACATCTGGTTCATCAACATCAGTTTGTGCCTACGACGTTTATTGCTTTGGGAAAGTGTTACTTGAACTGGTGACTGGTAAGCTGGGAATCAGTGCTTCCAGTGAGGGTGTATTAAGGGAATGGCTTGATCAAATTCTACCTTTCATTAACATGTATGACAAGGAGCTTGTGACGAAAATCGTTGACCCATCTCTTGTTGTGGATGAGGATTTCTTAGAGGAAGTGTGGGCAATAGCCATTGTTGCCAGGTCATGCCTAAACCCAAAACCTTCAAGACGACCACCGATGAGATATGTTCTCAAGGCTTTGGAAAATCCTTTAAAAGTTGTAAGAGAAGAAAGTTCGAGTTCTGCGCGGCTGAAAGCAACCTCTTCTAGAGGCTCTTGGAATGCTACTTTGTTTGGTAGTTGGCGTCAGAGTTCGTCTGATGTAGCCGTAGTCCCTGCAGCTTCTGGTACGAAATTAGAAGGGGCTAGTAGTTTGAAGCTTTCAGCAACTAGCAGTTCATCGTCGCGGAGACGTCATTCAAATGAGATATGCCCTGAACCATCATTTGGCTTACCTGATGTAGAGAGGGTGGACCCCTGA 2676 0.4219 MVDPRGIFWFWFVLLLLFLSFHGTLEQTQPLTSPLERESLLQLRTSLGLRSKEWPRKPDPCLIWIGITCQNGRVVGINISGFRRTRIGRRNPQFSVDALANFTLLQSFNASGFYLPGSIPDLFGVSLRSLRVLDLRSCSIIDVIPNTIGNLTSLTGLYLSDNNLTGNVPDSLGQLSALSVLDLSGNSLTGNIPESFGSLANLSSLDLSGNFFSGSIPSGIGTLSRLQYLNLSGNDLNSLPAQLGGLTSLVDLDLSENSFTGGVLPDLRGLRNLRRMLLGNSMLNGPLPVDFFTVSLQLQTVVLRKNNFTGSLPVEMWSLPRLTFVDVSSNSFSGTLPSSSSSAGSTVAVLNISHNLFYGNLTPVLRRFSFVDLANNYYEGKVLDFMHNVSIDSNCLQNATNQKSTVECASFYAERGLSFDNFGQPNTTKATEGSGKSNKTKIILAAVLGGLGLLAILALLLVLLILCTRKRGNSSQRGNGVGPAPAGGSPPPPGVSVNLASVGDSFTYHQLLQATGDFSDANLIKHGHTGDLFNGVLENGIPVVIKRVDMRSTKKDAFLSELDFFNKVSHQRFVPLLGHCLENENEKFLVYKLMPKGDLSNCLFFKNTTSEDGTLQSLDWITRLKIATGAAEAVSYLHHECIPPIVHRDIQASSILLDDRYEVRLGSLSEACGQEGDAHQSKITRFLRLPQSSEQGTSGSSTSVCAYDVYCFGKVLLELVTGKLGISASSEGVLREWLDQILPFINMYDKELVTKIVDPSLVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPLKVVREESSSSARLKATSSRGSWNATLFGSWRQSSSDVAVVPAASGTKLEGASSLKLSATSSSSSRRRHSNEICPEPSFGLPDVERVDP 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07966 891 Gene3D Ribonuclease Inhibitor 34 191 IPR032675 -
Mepo3g07966 891 SMART LRR_typ_2 223 246 IPR003591 -
Mepo3g07966 891 SMART LRR_typ_2 199 221 IPR003591 -
Mepo3g07966 891 SMART LRR_typ_2 127 150 IPR003591 -
Mepo3g07966 891 SMART LRR_typ_2 319 343 IPR003591 -
Mepo3g07966 891 SMART LRR_typ_2 175 198 IPR003591 -
Mepo3g07966 891 SMART LRR_typ_2 151 174 IPR003591 -
Mepo3g07966 891 Gene3D Ribonuclease Inhibitor 293 408 IPR032675 -
Mepo3g07966 891 Pfam Leucine rich repeat 128 188 IPR001611 GO:0005515
Mepo3g07966 891 Pfam Leucine rich repeat 201 258 IPR001611 GO:0005515
Mepo3g07966 891 FunFam Putative LRR receptor-like serine/threonine-protein kinase 594 819 - -
Mepo3g07966 891 MobiDBLite consensus disorder prediction 853 870 - -
Mepo3g07966 891 ProSiteProfiles Leucine-rich repeat profile. 225 247 IPR001611 GO:0005515
Mepo3g07966 891 MobiDBLite consensus disorder prediction 851 891 - -
Mepo3g07966 891 SUPERFAMILY Protein kinase-like (PK-like) 495 799 IPR011009 -
Mepo3g07966 891 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 431 824 - -
Mepo3g07966 891 Gene3D Ribonuclease Inhibitor 192 292 IPR032675 -
Mepo3g07966 891 FunFam Leucine-rich repeat receptor protein kinase EMS1 193 290 - -
Mepo3g07966 891 MobiDBLite consensus disorder prediction 472 494 - -
Mepo3g07966 891 FunFam Predicted protein 488 593 - -
Mepo3g07966 891 Gene3D Phosphorylase Kinase; domain 1 496 592 - -
Mepo3g07966 891 Gene3D Transferase(Phosphotransferase) domain 1 594 821 - -
Mepo3g07966 891 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 33 192 - -
Mepo3g07966 891 ProSiteProfiles Protein kinase domain profile. 518 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07966 891 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 294 424 - -
Mepo3g07966 891 SUPERFAMILY L domain-like 84 412 - -
Mepo3g07966 891 Pfam Protein tyrosine and serine/threonine kinase 524 798 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07966 Mepo-Chr3 92555318 92560770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07966 27 691 Miscellaneous Gene Families AT2G16250 56.825 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Mepo3g07966 PK_Tyr_Ser-Thr 8.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07966 - - gmx:100776587 1279.23