Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07953 ATGGCTTCTGACGGAGCAACTTCAGCGGCGAATTCAAGTCGTCGGAAGCCGTCGTGGAGGGAGAGAGAGAACAACAGGAGGAGAGAGAGACGGAGGAGAGCTATAGCGGCAAAGATTTACGCGGGATTAAGGTCTCAGGGGAATTATAATTTACCAAAACATTGTGATAACAACGAAGTGTTGAAAGCTCTTTGTGCTGAAGCTGGTTGGACTGTTGAAGAAGATGGCACCACTTATCGCAGGGGATCGAGGGCAGAAACACCAGGCGATGGTGCAGGAAATTTTAACAGAAACAACCCATTTTCATCTCAAAATCCAAGTCCTCTTTCATCATCATTTCCAAGTCCAATCCCTTCCTACCAAGTTAGCCCCTCTTCCTCTTCATTTCCGAGCCCGTCTCGTATGGATGCAAACAACAATGCATCAAATTACATTCCATATGCTCGCAGCATGTTCCCCAACATGTCTCTCCCACCTTTGAGAATATCAAACAGCGCGCCCGTGACGCCACCTGTCTCATCACCAACCTCAAGAAACCCTAAACCCATGATTCCAACATGGGAATCAATTGCCAAAGCATCGGGGACATCCTTCAATCACCCTTTCTTTGCAGCTTCTGCGCCTACTAGTCCATCCCACCGGAACCTTTATACACCACCCACTATTCCTGAATGTGATGAGTCTGATACCTCCACTGTTGAGTCTGGCCAGTGGTTGAATTTCCAAGCCTTTGCAGCTTCTGCTAAATCAGTCTCTCCTACATTAAACTTTATGAAACCTGTAATTAATGAGCAGCATAACATGCTGCCACATAACAGAATGCAGGAGATGAGGATTTCAGAGCCAGAGTTTGGGGTGCAGGTCAAGCCTTGGGTTGGGGAAAGGATTCATGAAGTGGGCTTGGATGATTTGGAGCTTACTCTTGGAAATGGAAAGGCACCTAGTTAA 948 0.4684 MASDGATSAANSSRRKPSWRERENNRRRERRRRAIAAKIYAGLRSQGNYNLPKHCDNNEVLKALCAEAGWTVEEDGTTYRRGSRAETPGDGAGNFNRNNPFSSQNPSPLSSSFPSPIPSYQVSPSSSSFPSPSRMDANNNASNYIPYARSMFPNMSLPPLRISNSAPVTPPVSSPTSRNPKPMIPTWESIAKASGTSFNHPFFAASAPTSPSHRNLYTPPTIPECDESDTSTVESGQWLNFQAFAASAKSVSPTLNFMKPVINEQHNMLPHNRMQEMRISEPEFGVQVKPWVGERIHEVGLDDLELTLGNGKAPS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07953 315 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 10 312 IPR033264 GO:0003700|GO:0006351|GO:0009742
Mepo3g07953 315 MobiDBLite consensus disorder prediction 77 135 - -
Mepo3g07953 315 Pfam BES1/BZR1 plant transcription factor, N-terminal 12 143 IPR008540 -
Mepo3g07953 315 MobiDBLite consensus disorder prediction 92 135 - -
Mepo3g07953 315 MobiDBLite consensus disorder prediction 15 30 - -
Mepo3g07953 315 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07953 Mepo-Chr3 92410266 92412370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07953 14 313 BZR Transcription Factor Family AT1G75080 65.409 4.68e-111 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Mepo3g07953 BES1_N 8.1e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07953 K14503 - gmx:100803869 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07953 3 92410266 92412370 Mepo3g07953 3 92410266 92412370 ECH
Mepo4g01753 4 22808212 22809604 Mepo3g07953 3 92410266 92412370 PCT