Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07949 ATGCTAGATCCTCAGAAAAATACTTCACCAGCAATGCCACTTTCTACTACACCACCACCGTCAAAAAAGAAGCGAAGCCTCCCTGGAATGCCAGATCCAGATGCTGAAGTAATCGCTTTATCACCCAAAACTTTACTAGCAACGAACCGTTTCATATGCGAGATCTGCAACAAAGGATTCAAACGGGAACAAAATCTTCAACTTCACCGGCGAGGACACAACATGTCGTGGAAGCTCCGGCAGCGACCGAACGACGAAATCCTCCGCAAGAAAGTGTACGTTTGTCCTGAGCCTTCCTGCGTCCATCACAATCCTTCAAGAGCACTCGATGATCTCACAGGAGTGAAAAAGCACTTTTGTAGAAAGCACGGTGAGAAGAAATGA 384 0.4661 MLDPQKNTSPAMPLSTTPPPSKKKRSLPGMPDPDAEVIALSPKTLLATNRFICEICNKGFKREQNLQLHRRGHNMSWKLRQRPNDEILRKKVYVCPEPSCVHHNPSRALDDLTGVKKHFCRKHGEKK 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07949 127 MobiDBLite consensus disorder prediction 1 33 - -
Mepo3g07949 127 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Mepo3g07949 127 Pfam Zinc-finger double-stranded RNA-binding 51 73 IPR022755 -
Mepo3g07949 127 SUPERFAMILY beta-beta-alpha zinc fingers 49 75 IPR036236 -
Mepo3g07949 127 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Mepo3g07949 127 FunFam protein indeterminate-domain 12-like 30 99 - -
Mepo3g07949 127 SMART c2h2final6 51 73 IPR013087 -
Mepo3g07949 127 SMART c2h2final6 93 123 IPR013087 -
Mepo3g07949 127 Gene3D Classic Zinc Finger 51 99 - -
Mepo3g07949 127 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 14 127 IPR031140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07949 Mepo-Chr3 92393439 92393977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07949 22 127 IDZ Gene Family AT3G50700 83.019 4.81e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g07949 zf-C2H2_jaz 1.3e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07949 K25870 - psat:127082208 217.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07949 3 92393439 92393977 Mepo3g07949 3 92393439 92393977 ECH