Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo3g07946 | ATGTCTAAACGCTTTAAGATGAAATTTACAATCCCTACTTTTCAAATGTGTCGCTCCAATGACCTTTCCTCTTTCCCCGGGAATCCAGTCCCTGCCATATACCGCCTTTCTCCGGTGAACTCCAAAGCACATGACATAGGGTATCCAAACCTTCCTGCTTTGTCGCCGGAACACCAATGCAATGTGTCATCAAAGGTCAAGAAAGTGAAATCTAAAGGCCGGAAAAGTACATCCGACGTTCCCTCAAGAAGAAGTGAGTTTCTAATTGATAAAATCAATGAAGAGGAAAGTGAATCTTTGATTTCTTGCTTAGCAAGATTCTCCGAAGACGAGAAGGTCCATTCTTCTAGTACCATGGATAGTAAAGTTAGGCCTATCTCAAATTATATTGATAAAAAGGAGAATAAAGATTTAACTAGCGCGAATAGAAGGACGATAAGTCGTGTAAAGAAGGTTGAGAGAGTGAGGTTTCAAAGTATTACGGAGAATCAAAGAGGAACAGAAACAAAGGTTATGTCAAGTAGAATGGAAGAGAATCGAAGAGGAACTGAAACGAAGGTTATGTCAAGTAGAATGGAGGAGAAGGTAAAAGAGAGCTTTGCTTTGGTGAAAAAGTCAAAGGATCCTTACGAAGACTTCAAGAAATCAATGTTAGAGATGATAGAAGAGATGGAAATGTCCGAGGCCAAGGACTTAGAGCAACTATTGCAGTGTTTTTTGGCTCTGAATTCTAGAGATTATCATGGAGTAATTGTGCGAGCTTTCATGGAGATTTGGCAACAAATGTTCGTTTGGAATCCTGAGTCAGTAAAAAATCTTCAAACAAATGTTCAAACCAAGGATGTAGAAAATTAG | 855 | 0.3918 | MSKRFKMKFTIPTFQMCRSNDLSSFPGNPVPAIYRLSPVNSKAHDIGYPNLPALSPEHQCNVSSKVKKVKSKGRKSTSDVPSRRSEFLIDKINEEESESLISCLARFSEDEKVHSSSTMDSKVRPISNYIDKKENKDLTSANRRTISRVKKVERVRFQSITENQRGTETKVMSSRMEENRRGTETKVMSSRMEEKVKESFALVKKSKDPYEDFKKSMLEMIEEMEMSEAKDLEQLLQCFLALNSRDYHGVIVRAFMEIWQQMFVWNPESVKNLQTNVQTKDVEN | 284 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo3g07946 | 284 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 201 | 262 | IPR006458 | - | |
| Mepo3g07946 | 284 | ProSiteProfiles | OVATE domain profile. | 202 | 261 | IPR006458 | - | |
| Mepo3g07946 | 284 | MobiDBLite | consensus disorder prediction | 171 | 190 | - | - | |
| Mepo3g07946 | 284 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 83 | 263 | IPR038933 | GO:0045892 | |
| Mepo3g07946 | 284 | Pfam | Transcriptional repressor, ovate | 206 | 263 | IPR006458 | - | |
| Mepo3g07946 | 284 | MobiDBLite | consensus disorder prediction | 164 | 190 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo3g07946 | Mepo-Chr3 | 92364069 | 92365174 | Dispersed/Transposed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | OFP | Mepo3g07946 | Ovate | 1.5e-24 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo3g07946 | - | - | gmx:102662518 | 280.026 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mepo3g07946 | 3 | 92364069 | 92365174 | Mepo3g07946 | 3 | 92364069 | 92365174 | ECH |