Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07913 ATGGAATCTACTAATCTCCATCATCTCCAAGACCATCCTCCTCCTCCTCCTGTTTCTTCTTTATCCAGTACCCCATCCTATACAGTTGGAGGAACCACCACCCACTCTTGGACCCCAAACATCACTTTGAATAATGCAGGCAACGTCAACTCAAATAACCTCCAAGAAGCTAATACCAGATCAAGATCATCTTTAACACTCAAGAACAATTATATGAATCAAGATTTAGGTTATCATAGTCATCAATGGACAAGTGATGCTGCTGCCGAAGAGAGCTGCTTAAACAGCAAACAGTTCAATCATAACAACAACTTAGATTCAGAGTTTTCCAAGAATAGTACTATTAAGGAAGAGATCTCATTTGCTAATTTCCCCAAATTCACTGAAATGCTTAATTACACTGCTCCTAATTCCAGCATGGAATGCTATCGAATACTTGATCCTTCCACAACAAATTCAACAGAGATGAAGAACAATAATATTGATGAGCACAAGGATATGAATGCTCTCATGCTCAAGACACTTTTTACAGGAGGAGACTTTTATAACGGTGAAAATTATCCTAACTTTGGAGACACAAGTATTCCAACTCCAAGTAGAGGCAATAATATTAGTAGCCAGATTCACCCAAGTATCAATATATCAAACTTGAATCATTACTCGTCTTCGTCTGCTACCACATCCTTGGATATGAACATGCAGTCATTAGATCTATTAACTAATTCACCAACATATGATCATGACAACCTTTCTTTTCGTCTTCATCCTATGCAGCATCACCACCCCACGAACATGTCCTCTTCTACTAACTCTATTCATAAGCCATCACTATTCAGCAATGGCGCGGCAGAAACAAAGAGAGGGTGCACCTTAATGGAGTCAAAGGTTTCTCAATCTCAAACGGCGTTGAAGAAATCACGATCTTCATCAGAATCACGCCCTTCATGCCCACCCTTTAAGGTTAGGAAAGAAAAATTAGGAGATAGGATTGCGGCTCTACAGCAGTTGGTGGCTCCTTTTGGAAAGACTGACACAGCATCAGTACTTATGGAAGCGATTGGATACATTAAATTCCTTCAAGGTCAAGTCGAGACACTGAGTGTTCCCTATATGAAGTCGTCGCAGAACCAAAACAATAGAGTGATGCAAGGGGGTTCAGCCAAAGGTGACACAAAGGGAGAACCAAAACAAGACCTGAGAAGTCGAGGCCTCTGTCTCGTGCCATTATCATGCATGTCATACATAACCGGTGATGGCAGCACTGAGGTGTGGCAACAACGCCCAAACTTTGGTGGACCAGCTTAA 1305 0.413 MESTNLHHLQDHPPPPPVSSLSSTPSYTVGGTTTHSWTPNITLNNAGNVNSNNLQEANTRSRSSLTLKNNYMNQDLGYHSHQWTSDAAAEESCLNSKQFNHNNNLDSEFSKNSTIKEEISFANFPKFTEMLNYTAPNSSMECYRILDPSTTNSTEMKNNNIDEHKDMNALMLKTLFTGGDFYNGENYPNFGDTSIPTPSRGNNISSQIHPSINISNLNHYSSSSATTSLDMNMQSLDLLTNSPTYDHDNLSFRLHPMQHHHPTNMSSSTNSIHKPSLFSNGAAETKRGCTLMESKVSQSQTALKKSRSSSESRPSCPPFKVRKEKLGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQGQVETLSVPYMKSSQNQNNRVMQGGSAKGDTKGEPKQDLRSRGLCLVPLSCMSYITGDGSTEVWQQRPNFGGPA 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07913 434 MobiDBLite consensus disorder prediction 1 53 - -
Mepo3g07913 434 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 104 413 - -
Mepo3g07913 434 MobiDBLite consensus disorder prediction 294 315 - -
Mepo3g07913 434 MobiDBLite consensus disorder prediction 294 320 - -
Mepo3g07913 434 Gene3D - 320 383 IPR036638 GO:0046983
Mepo3g07913 434 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 320 373 IPR036638 GO:0046983
Mepo3g07913 434 CDD bHLH_AtbHLH_like 319 367 IPR045239 -
Mepo3g07913 434 FunFam Transcription factor bHLH123 family 320 382 - -
Mepo3g07913 434 MobiDBLite consensus disorder prediction 22 53 - -
Mepo3g07913 434 MobiDBLite consensus disorder prediction 374 399 - -
Mepo3g07913 434 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 310 359 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07913 Mepo-Chr3 92146913 92152306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07913 30 432 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 37.255 4.46e-60 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07913 - - mtr:25490216 800.431