Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07891 ATGGCTGGGTTATTTTGTCTAGGTAGAAAGGAAGATCAAAAAGAAGATAAATTAGATTATTATAGTAGTAAGGAATTATTGTTAAGAAACGAGGAGATCTATAATAACAAAGGGTTAGAGATATGGCCACAACAAAGCTTAAACATTTACAATGCGTTTGGAGTGGGTCATAGTAGTAGTAGCAGAAATTCTTCGTTTGATGAGTGTGAAAGAAGATTTGGTATAATGAGGCGTAGTGGAGGAATAAATTGTCAGGACTGTGGTAACCAAGCAAAGAAAGATTGTATACATCTAAGATGCAGAACTTGTTGTAAGAGTCGAGGGTTTCAGTGTCAAACACATGTTAAGAGTACTTGGGTTCCCGCTGCTAAACGCCGTGAACGACAACAACATCTCTCTGCGTTACCGTTTCGTCGTCGAGATCATGGAGACAACTTCAAGCGACACACAGAAATTAATCAAGGTGCAACCTCTCTTCCTTGCCCTCAACCACCCATCCCTACCACAGGGTTGGAGTTGGGACAATTCCCACCTGAGGTGAGTTCTCCAGGAGTAACGTTTCGGTGTGTGAGAGTGAGTTCATTGGACGGTCCAGATCATGAGCAATGCGCGTATCAAACGGCCGTGAACATAGGAGGGCATGTTTTCAAAGGAATTCTCTATGATCAAGGTCCTCCAAATCTTTACACCAGTATTGCACCTATTGAAGGTTCTTCTGGCCATGGTGGAGGTCATCATCAACCTCAACAACTTGATTTCTTGACTGCAACAACAACCACAGCTACAACCAGCGGTATCCATTTCGACCCTTCGCTTTACTCAGCTCCGCTCAATGCTTTCATGGCAGCTGGTACACAATTTTTCCACCCCCAACATCCTAATTAA 885 0.4305 MAGLFCLGRKEDQKEDKLDYYSSKELLLRNEEIYNNKGLEIWPQQSLNIYNAFGVGHSSSSRNSSFDECERRFGIMRRSGGINCQDCGNQAKKDCIHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQHLSALPFRRRDHGDNFKRHTEINQGATSLPCPQPPIPTTGLELGQFPPEVSSPGVTFRCVRVSSLDGPDHEQCAYQTAVNIGGHVFKGILYDQGPPNLYTSIAPIEGSSGHGGGHHQPQQLDFLTATTTTATTSGIHFDPSLYSAPLNAFMAAGTQFFHPQHPN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07891 294 NCBIfam LRP1 C-terminal domain 175 225 IPR006511 -
Mepo3g07891 294 NCBIfam putative zinc finger domain, LRP1 type 83 125 IPR006510 -
Mepo3g07891 294 Pfam Domain of unknown function (DUF702) 81 225 - -
Mepo3g07891 294 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 17 275 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07891 Mepo-Chr3 91919205 91920917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07891 1 288 C2H2 Transcription Factor Family AT1G19790 43.182 5.23e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mepo3g07891 DUF702 1.2e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07891 - - psat:127083804 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07891 3 91919205 91920917 Mepo5g00935 5 9076103 9077647 ECH
Mepo3g07891 3 91919205 91920917 Mepo2g02361 2 33397118 33398732 ECH
Mepo3g07891 3 91919205 91920917 Mepo3g07891 3 91919205 91920917 ECH
Mepo4g01830 4 23510546 23512019 Mepo3g07891 3 91919205 91920917 PCT