Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07884 ATGCTTCTTTATTCTGTACCGCCGATGAAGCCGCCTTATGCTCCACCTGCGACCACCGAAAGAAGAGGTTTTGTTTTTTGTCAGGAAGATAGAGCGATTGTGTGCAAAGAGTGTGATTTGAAGATTCATTGTTCCAATGAACACACCAAAAAGCATAATAGGTTTCTTCTAAGTGGGATCAAGCTGCACTCTCTTGCTCCTCCTCCCACTCTTCATGAAGAAACTGGTAGTTTTACTATATCTGAGTACTTGATAAACACTATCCCAGGTTGGAAGTTTGAAGATTTCCTTGATTCCCCTTCTTCTGTTCCCTCTCATGAACCACAACAGCAGAATCATATTGGTAAAGATACTACATTGTCAATAGTACATGATGATGCTACTTATCATATTCATGAGGAGAATATTCTGGTTTCTTTCTCCGGTGAGAGCATGTGTGGGATCTATGTTCCTCAAGCACCACTGTATTATTCTGAAAAAATGGATAACAGATCAAACACAATTAATGAAGCCACCAATTTCAGCAGCAGTTTGGGGGATTTCACAGTTCCACAGATAACAATCCCTCCCAATTAA 576 0.4028 MLLYSVPPMKPPYAPPATTERRGFVFCQEDRAIVCKECDLKIHCSNEHTKKHNRFLLSGIKLHSLAPPPTLHEETGSFTISEYLINTIPGWKFEDFLDSPSSVPSHEPQQQNHIGKDTTLSIVHDDATYHIHEENILVSFSGESMCGIYVPQAPLYYSEKMDNRSNTINEATNFSSSLGDFTVPQITIPPN 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07884 191 PANTHER B-BOX ZINC FINGER PROTEIN 22 20 187 - -
Mepo3g07884 191 CDD Bbox1_BBX-like 20 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07884 Mepo-Chr3 91868864 91869698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07884 20 190 C2C2-CO-like Transcription Factor Family AT1G75540 27.444 1.56e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07884 - - tpra:123898686 142.51