Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07878 ATGGCAACAACGGCTATATTTCTCACCTTCATTGCATTAACCTTAACACATGCAGCAGCAGCAGCAGCAACACAAATCAACAACTCATCTCATTCCGAAATCCAAGCCTTAACAACCTTCAAACTAAACCTTCTTGACCCACTCAATGCCTTAACAACTTGGGATCCATCAACACCTTCAGCACCATGTGACTGGCATGGCATTCTCTGTTACTACAACAACAACAGAGTTCACACTATACGTTTACCTCGTCTTCAACTCACTGGTTCAATATCTTCATCACTCTCTAATCTCTCACAGCTTCGTAAACTTAGTCTCCATTCCAACAACCTTAACTCCTCCATACCTTCTTCTCTTTCTCATTGTCTCTTCTTACGTGCTGTTTATCTTCACAACAACTCTCTCTCTGGTTATCTCCCTCCTTCACTTCTCACCCTCACCAACTTACAAATTCTCAACCTTGCTCGTAACTTTCTCTCTGGTACCATCCCCAATAACCTCTCTAACTCCCTAAGGTTTCTTGATCTTTCTTCTAACTCATTCTCCGGTCACATTCCGGGGAACTTTTCGTCCAAATCTCAGCTTCAACTCATCAATTTTTCACATAATCAGTTCACCGGTGGAATACCGGTTACTGTTGGAGCATTACAACATTTGGAGTATCTGTGGTTAGACAACAACCATCTTCATGGAACGTTACCTTCTGCTGTTGCAAACTGTTCCTCTATGGTGCACCTTAGTGCAGAGGATAATTTCATTGGCGGGTTGGTTCCTTCCACGATAGGGACTATGCCTAAGCTTCAAGTGCTGTCACTTTCCATGAATCAACTTTCTGGTTTTGTCCCCACAACACTGTTTTGCAATGAAGACAACAACAATAATAACAATGCTACTAATCTTCGTATTGTTCAGCTTGGGTTTAATAGGATCACGGGTATTTCAAACCCTCAAAATGGAAAATGTGTTGATTATTTTTTGGAGATTTTAGACCTTAAAGAGAATCACATTATTCACACTTTGTTTCCTTCTTGGTTGACCAATGTGAAATCTTTGAAGGGTCTTGATCTCTCTGGAAACTCATTTTCAGGTTCTCTGCCTCAAGATATTGGAGATCTTTTCTTGTTAGAAGAGTTAAGACTTTCTGATAATTTGTTATCTGGTGTTGTTCCAAGTAGCATTGTGAAATGTAGGTTGTTGAAGGTTCTTGATCTTCAAAGAAATCGATTATCAGGTCTCATTCCTTATTTTCTTGGAGAATTGAAAAGTTTGAAGGAGTTATCTCTTGGTGGTAACTTTTTTACTGGTTCAATTCCAATGAGTTATGGAATGCTTAATGAGTTAGAGATTTTGGATTTAAGCAACAATAAATTGAATGGAATTTTGCCTTTGGAGATCATGCAGTTAGGTAACATGAGTGTTTTAAATCTCAGCAATAATAGATTCTCCGGTCAAGTTTCGTCTCAAATTGGAGACTTGATGGCTTTGCAGGTTCTTAATTTGAGTCACTGTGGCTTTTCCGGTAGCGTTCCAGCTACATTGGGGAATTTGATGAAACTGAGAGTGTTGGATTTAAGCAAACAAAATCTTTCAGGTGAGTTACCTGTTGAGGTTTTCGGATTACCAAGTTTGGAAGTTGTGGCACTTGATGAAAACCATTTGAGTGGTTCTGTTCCTGAGGGTTTCAGCAGCATTGTTAGTCTAAAGTATCTTAATCTCAGTTCCAATGATTTTGTTGGCAACATTCCAACAACCTATGGTTTTCTAAGTTCCTTGGTTGTTCTTTCTTTGTCTCACAATTTCATTTCTGGTTCAATACCGAATGACATTGGTGGTTGTTCTCAACTTGAAGTGCTTGAGCTTCAGTCAAATCGTTTAGCAGGTAACATTGTTCCAAGTGTTATCTCTAAACTTTCACGTTTAAAGGAGCTTAATTTAGGACACAATGGATTTAAAGGTGAGATCCCAGATGAGATTTCAAAGTGTTCTGCTTTGAATTCACTTGATTTAGATGGTAATCACTTAACTGGTCACATACCACAATCCTTGTCCAAATTATCAAATTTGAAGACTTTGAACCTCTCTTCAAATCAATTGACAGGAGTGATTCCAGTTGGTCTTCCCCGCATTTCGGGTTTGAAGTATTTAAATGTTTCCAACAACAACCTCGATGGTGAGATTCCACCAATGCTGAGTTCTAGATTCAATGACCCATCCGTATACGCAATGAACAAGAAGTTATGTGGGAAACCATTGCATAGAGAATGTGGAAAATCGAAAAGACGAAAGAGAAAAAGGCTAATCATCATCATAGGTGTTGCAGCTGCAGGACTATGTCTTTTAGCATTGTGTTGTTGTGGCTATGTTTATAGTCTCTTAAGGTGGCGAAGAAAGCTTCGAGAAGGCGTAACAGGTGAGAAGAAACGCAGTCCAAGTGCAGGCTCAAATGGAGAAAGAAACAGTAGAGGAAGTGGTGAAAATGGAGGACCAAAACTCATAGTATTCAACAACAAAATCACATATGCTGAGACATTAGAAGCAACAAGGAACTTCGATGAAGAAAACGTGTTGAGTAGAGGAAAACATGGACTTGTTTTCAAAGCTTCATATCAAGACGGAATGGTTCTATCAATTCGTAGACTTCCAAACGGATCAACATTGATGGATGAAGCTACATTCCGCAAAGAAGCAGAATCATTAGGCAAAGTTAAGCATAGAAACTTAACAGTTTTACGTGGATATTATGCAGGACCACCACCTGATGTAAGACTATTAATTTATGATTACATGCCAAATGGAAATTTAGGTACATTGCTTCAAGAAGCTTCACAACAAGACGGTCATGTTTTGAATTGGCCAATGCGTCATTTGATTGCATTAGGTATTGCCCGTGGCTTGAGTTATTTACACTCTGTGGAAATTGTTCATGGTGATGTTAAGCCACAAAATGTTCTTTTTGATGCTGATTTTGAAGCCCATTTATCTGAATTTGGGCTTGACCGGTTAACAATGGTTAATAGTCCAATAGAAGCAACTGCATCGTCCTCAACAACGACGCCAGTTGGTTCTTTAGGCTACGTGGCACCGGAAGCAGTGTTAACCGGACAAGTAACAAAGGAAGGCGATATTTACAGTTTTGGGATAGTGTTGTTGGAGATATTGACAGGGAGAAAGGCAGTGATGTTTACACAAGATGAAGATATAGTGAAGTGGGTGAAGAAGCAGTTACAAAGAGGTTTGATTTCGGAGTTGTTGGAACCTGGTTTGCTTGAGATTGATCAAGAATCATCAGAATGGGAAGAGTTTTTGTTAGGTGTTAAAGTTGCACTACTTTGCACAGCACATGATCCTCTTGATAGACCTTCTATTAATGATATTGTATTCATGCTTGAAGGTTGTCGTGTTGGACCTGATATCCCTTCCTCTGCTGATCCCACCACACTACCTTCCCCTGCTTCTTGA 3459 0.3946 MATTAIFLTFIALTLTHAAAAAATQINNSSHSEIQALTTFKLNLLDPLNALTTWDPSTPSAPCDWHGILCYYNNNRVHTIRLPRLQLTGSISSSLSNLSQLRKLSLHSNNLNSSIPSSLSHCLFLRAVYLHNNSLSGYLPPSLLTLTNLQILNLARNFLSGTIPNNLSNSLRFLDLSSNSFSGHIPGNFSSKSQLQLINFSHNQFTGGIPVTVGALQHLEYLWLDNNHLHGTLPSAVANCSSMVHLSAEDNFIGGLVPSTIGTMPKLQVLSLSMNQLSGFVPTTLFCNEDNNNNNNATNLRIVQLGFNRITGISNPQNGKCVDYFLEILDLKENHIIHTLFPSWLTNVKSLKGLDLSGNSFSGSLPQDIGDLFLLEELRLSDNLLSGVVPSSIVKCRLLKVLDLQRNRLSGLIPYFLGELKSLKELSLGGNFFTGSIPMSYGMLNELEILDLSNNKLNGILPLEIMQLGNMSVLNLSNNRFSGQVSSQIGDLMALQVLNLSHCGFSGSVPATLGNLMKLRVLDLSKQNLSGELPVEVFGLPSLEVVALDENHLSGSVPEGFSSIVSLKYLNLSSNDFVGNIPTTYGFLSSLVVLSLSHNFISGSIPNDIGGCSQLEVLELQSNRLAGNIVPSVISKLSRLKELNLGHNGFKGEIPDEISKCSALNSLDLDGNHLTGHIPQSLSKLSNLKTLNLSSNQLTGVIPVGLPRISGLKYLNVSNNNLDGEIPPMLSSRFNDPSVYAMNKKLCGKPLHRECGKSKRRKRKRLIIIIGVAAAGLCLLALCCCGYVYSLLRWRRKLREGVTGEKKRSPSAGSNGERNSRGSGENGGPKLIVFNNKITYAETLEATRNFDEENVLSRGKHGLVFKASYQDGMVLSIRRLPNGSTLMDEATFRKEAESLGKVKHRNLTVLRGYYAGPPPDVRLLIYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLSYLHSVEIVHGDVKPQNVLFDADFEAHLSEFGLDRLTMVNSPIEATASSSTTTPVGSLGYVAPEAVLTGQVTKEGDIYSFGIVLLEILTGRKAVMFTQDEDIVKWVKKQLQRGLISELLEPGLLEIDQESSEWEEFLLGVKVALLCTAHDPLDRPSINDIVFMLEGCRVGPDIPSSADPTTLPSPAS 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07878 1152 Gene3D Phosphorylase Kinase; domain 1 826 928 - -
Mepo3g07878 1152 Gene3D Transferase(Phosphotransferase) domain 1 929 1136 - -
Mepo3g07878 1152 SUPERFAMILY L domain-like 32 339 - -
Mepo3g07878 1152 SMART serkin_6 850 1128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07878 1152 Pfam Leucine rich repeat 518 577 IPR001611 GO:0005515
Mepo3g07878 1152 Pfam Leucine rich repeat 663 722 IPR001611 GO:0005515
Mepo3g07878 1152 Pfam Leucine rich repeat 326 385 IPR001611 GO:0005515
Mepo3g07878 1152 Pfam Leucine rich repeat 398 457 IPR001611 GO:0005515
Mepo3g07878 1152 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 70 290 - -
Mepo3g07878 1152 ProSiteProfiles Leucine-rich repeat profile. 446 467 IPR001611 GO:0005515
Mepo3g07878 1152 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 567 1129 - -
Mepo3g07878 1152 Gene3D Ribonuclease Inhibitor 188 289 IPR032675 -
Mepo3g07878 1152 ProSitePatterns Serine/Threonine protein kinases active-site signature. 973 985 IPR008271 GO:0004672|GO:0006468
Mepo3g07878 1152 SUPERFAMILY RNI-like 298 558 - -
Mepo3g07878 1152 Pfam Protein kinase domain 852 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07878 1152 MobiDBLite consensus disorder prediction 808 822 - -
Mepo3g07878 1152 SUPERFAMILY L domain-like 469 727 - -
Mepo3g07878 1152 FunFam Piriformospora indica-insensitive protein 2 341 439 - -
Mepo3g07878 1152 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Mepo3g07878 1152 Gene3D Ribonuclease Inhibitor 439 488 IPR032675 -
Mepo3g07878 1152 MobiDBLite consensus disorder prediction 802 830 - -
Mepo3g07878 1152 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 929 1137 - -
Mepo3g07878 1152 Gene3D Ribonuclease Inhibitor 290 438 IPR032675 -
Mepo3g07878 1152 PRINTS Leucine-rich repeat signature 685 698 - -
Mepo3g07878 1152 PRINTS Leucine-rich repeat signature 447 460 - -
Mepo3g07878 1152 SMART LRR_typ_2 637 661 IPR003591 -
Mepo3g07878 1152 SMART LRR_typ_2 468 492 IPR003591 -
Mepo3g07878 1152 SMART LRR_typ_2 98 122 IPR003591 -
Mepo3g07878 1152 SMART LRR_typ_2 709 733 IPR003591 -
Mepo3g07878 1152 SMART LRR_typ_2 216 240 IPR003591 -
Mepo3g07878 1152 SMART LRR_typ_2 264 287 IPR003591 -
Mepo3g07878 1152 SMART LRR_typ_2 540 563 IPR003591 -
Mepo3g07878 1152 SMART LRR_typ_2 444 467 IPR003591 -
Mepo3g07878 1152 SMART LRR_typ_2 685 708 IPR003591 -
Mepo3g07878 1152 SMART LRR_typ_2 588 612 IPR003591 -
Mepo3g07878 1152 SMART LRR_typ_2 372 395 IPR003591 -
Mepo3g07878 1152 SMART LRR_typ_2 146 170 IPR003591 -
Mepo3g07878 1152 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 478 759 - -
Mepo3g07878 1152 Pfam Leucine Rich Repeat 148 169 IPR001611 GO:0005515
Mepo3g07878 1152 SUPERFAMILY Protein kinase-like (PK-like) 830 1140 IPR011009 -
Mepo3g07878 1152 Gene3D Ribonuclease Inhibitor 489 764 IPR032675 -
Mepo3g07878 1152 FunFam Putative LRR receptor-like serine/threonine-protein kinase 815 928 - -
Mepo3g07878 1152 Gene3D Ribonuclease Inhibitor 30 187 IPR032675 -
Mepo3g07878 1152 ProSiteProfiles Protein kinase domain profile. 850 1138 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07878 Mepo-Chr3 91828479 91832003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07878 6 1151 Receptor kinase-like Gene Family AT4G36180 61.645 0.0 1300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Mepo3g07878 Pkinase 8.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07878 - - gmx:100801571 1571.99