Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07840 ATGGCTGTTCACACAAAATACCGTCTTATTACTTACTCACAAGAGCTTGTAGATGGGCAGCCTATTTTTGTTTCATCAAACTGTCTTCCGGTTAAGGCAACGAAATATGACCCGGCTGGTCATTCTTTTCATGCTGCTGCACTTAAACTTCTTGGTGTTAAGAAAGAAGACAACAAAGATGCAGATAAGAAGAATGTGGTTGAAGATAAGGAACATGTTTATTTGCCATCTGATTCTTACAGCAGCAAGAGCAAGAAGAAATCTGGTGATGGAGACAAGCAACAGCAAGATCATTATGCATTATTGGGTTTGAGCCATCTTAGATACCTTGCTACGGAGGATCAAATTCGTAAAAGCTATCATAAAACTTCCTTGAGGTTTCATCCGGACAAACAGGCTGCTGCTGTTCTTTCCGAGCAAACCGAAGCTGCGAAAGAGGCAAAGAAGATTGAAATAGATGTTCATTTTAAGGCAATCCAAGAGGCTTATGCAGTGTTGGTTGATCCCGTAAAAAGAAGAATTTATGATTCTACAGACGAGTTTGATGATGAGATCCCCACTGACTGTGATCCACAAGACTTCTACAAGGTGTTTGGTCCTGCTTTTATGAGGAATGGGCGGTGGTCCGTTAATCAACCAATTCCATCTTTAGGTGATGATAAGTCTTCAATAAAGGAAGTTGATAGTTTCTACAATTTTTGGTATTCCTTTAAAAGCTGGAGAGAGTTTCCCCAGGCTGATGAGTTTGATCTTGAGCAAGCTGAATCCCGAGATCATAAAAGATGGATGGAAAGGCAGAATGCAAAACTGTCAGAAAAAGCTAGGAAGGAAGAGTATGCACGTATCCGCACTCTTGTTGATAATGCTTATAAGAGGGACCCTAGAATACTGAGAAGAAAGGAAGAGGCAAAAGCTGAGAAGAAAAGGAAAAAGGAGTCCAAGTACATGGCAAAGAAGTTGGAGGAGGAAGAAGCGGCCAGAATTGCTGAAGAGGAGAAACAACGAAAAGCAGAGGAAGATAAAAAAGCTGCCGAAGTTGCTTTGCAACAGAAGAAGGTGAAAGAGAAGGAGAAAAAGCTCTTGCGGAAGGAGCGAACACGTCTTCGAACTCTCTCAAGACCTATCTTGTCACAACACATACTTGATATTGCTGAAGACGATGTAGAAGAGCTTTGCATGTCATTTGATATTGAACAATTGAGGGGTTTGTGTGAGAAAATGGAAGGCAAAGAGGTGTTCGAGCAAGCAGAAGCTCTAAGAGATGCACTGAGTTGTAAGAAAAATGTGGTTGATGAGAAAAGTAATCAACAAAATGGCTCTGTCAAGGCTAATGGAAGCAGTAGTTCTCTAGCAGGCTACGTAGAGAAGAAGGAGAAACCTTGGACTAAAGAAGAGATTGAGCTATTGAGAAAAGGAATACAAAAGTTTCCCAAAGGAACTTCAAGGAGATGGGAGGTTGTTTCAGAGTACACTGGCACTGGAAGATCTGTTGAAGAAATAATGAAAGCAACTAAAACCGTTCTCCTCCAGAAGCCTGATACAGCCAAAGCTTTTGATACATTTCTCGAGAAGAGGAAACCTGCAGCACAATCAATTGCATCCCCACTGTCAACTAGAGAAGAATTGGAAGGGGTATCTATACCAACAACAACAACTGAAAATAGTGATGCAAAAACAACAACTACTATACCAACACCGACGATGACGACGACAACAATTCCAACACCGGTACCGACAGCAACAACCAGCATCAACTCGGAAGACTCTCAAGGAGTTTCAGATCAAGAGGCGTGGTCTGCAGTGCAGGAAAGAGCATTAGTTCAAGCTTTAAAAACCTTCCCAAAGGAAGCTAACCAGAGATGGGAACGAGTAGCTGCAGCTGTACCTGGGAAGACCGTGATCCAGTGCAAGAAAAAATTTGCCATGATGAAGGAAAATTTCAGGAACAAGAAAACTGCAGTTTGA 1965 0.4178 MAVHTKYRLITYSQELVDGQPIFVSSNCLPVKATKYDPAGHSFHAAALKLLGVKKEDNKDADKKNVVEDKEHVYLPSDSYSSKSKKKSGDGDKQQQDHYALLGLSHLRYLATEDQIRKSYHKTSLRFHPDKQAAAVLSEQTEAAKEAKKIEIDVHFKAIQEAYAVLVDPVKRRIYDSTDEFDDEIPTDCDPQDFYKVFGPAFMRNGRWSVNQPIPSLGDDKSSIKEVDSFYNFWYSFKSWREFPQADEFDLEQAESRDHKRWMERQNAKLSEKARKEEYARIRTLVDNAYKRDPRILRRKEEAKAEKKRKKESKYMAKKLEEEEAARIAEEEKQRKAEEDKKAAEVALQQKKVKEKEKKLLRKERTRLRTLSRPILSQHILDIAEDDVEELCMSFDIEQLRGLCEKMEGKEVFEQAEALRDALSCKKNVVDEKSNQQNGSVKANGSSSSLAGYVEKKEKPWTKEEIELLRKGIQKFPKGTSRRWEVVSEYTGTGRSVEEIMKATKTVLLQKPDTAKAFDTFLEKRKPAAQSIASPLSTREELEGVSIPTTTTENSDAKTTTTIPTPTMTTTTIPTPVPTATTSINSEDSQGVSDQEAWSAVQERALVQALKTFPKEANQRWERVAAAVPGKTVIQCKKKFAMMKENFRNKKTAV 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07840 654 SMART sant 594 646 IPR001005 -
Mepo3g07840 654 SMART sant 457 510 IPR001005 -
Mepo3g07840 654 FunFam Myb family transcription factor 592 652 - -
Mepo3g07840 654 ProSiteProfiles dnaJ domain profile. 97 179 IPR001623 -
Mepo3g07840 654 Pfam DnaJ domain 97 176 IPR001623 -
Mepo3g07840 654 SUPERFAMILY Chaperone J-domain 95 203 IPR036869 -
Mepo3g07840 654 ProSiteProfiles Myb-like domain profile. 598 644 IPR001005 -
Mepo3g07840 654 CDD DnaJ 97 168 IPR001623 -
Mepo3g07840 654 Gene3D DnaJ domain 80 198 IPR036869 -
Mepo3g07840 654 Gene3D - 590 654 - -
Mepo3g07840 654 Gene3D - 454 511 - -
Mepo3g07840 654 ProSiteProfiles SANT domain profile. 593 648 IPR017884 -
Mepo3g07840 654 CDD SANT 460 502 IPR001005 -
Mepo3g07840 654 PRINTS DnaJ domain signature 120 135 IPR001623 -
Mepo3g07840 654 PRINTS DnaJ domain signature 48 66 IPR001623 -
Mepo3g07840 654 PRINTS DnaJ domain signature 151 171 IPR001623 -
Mepo3g07840 654 MobiDBLite consensus disorder prediction 548 578 - -
Mepo3g07840 654 Pfam Myb-like DNA-binding domain 459 500 IPR001005 -
Mepo3g07840 654 SUPERFAMILY Homeodomain-like 595 642 IPR009057 -
Mepo3g07840 654 ProSiteProfiles Myb-like domain profile. 453 508 IPR001005 -
Mepo3g07840 654 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Mepo3g07840 654 SMART dnaj_3 96 171 IPR001623 -
Mepo3g07840 654 Coils Coil 303 366 - -
Mepo3g07840 654 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 653 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Mepo3g07840 654 CDD SANT 597 644 IPR001005 -
Mepo3g07840 654 SUPERFAMILY Homeodomain-like 459 503 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07840 Mepo-Chr3 91478546 91481551 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07840 98 297 C2H2 Transcription Factor Family AT1G74250 29.167 9.68e-17 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g07840 DnaJ 1e-15 CL0392