Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07773 ATGGGAGATGGTGCTGCAGTGACATCATCTGCAACCATGATGGAAGCTCCACCACAAGATCAAAATTCAATGGATTTTGATTACATGAGTGAACTTTTGTTAGATGGTTGTTGGTTGGAAGCTTCTGCTGATGGATCTGAGTTCTTGCTGCAAAGTTCTCCTTTTTCCAATCCAATCTTTGACCCTTCATTCTCTTGGCCTGCCTTGGAGAACAACGAGCAATCCGGCAATGATGTTCAGCACGAGTCTCAAGATGCTCCTCTTGGTACTGAACAGGAAAGCTGGATTATAGTTAATAATGCTGGTAGTAGCGACCTGCAGCAGTGTGAGTTTAAGACTCATTTGGGTGAAGGGGTTAGTAGGCTGTGGATTCCACCGACGCCTAATCCAGGACCTGGTGGATCTTCCATAACAGAGAAGCTGATAAGGGCCCTCAAGTGGATCAAAGATTTCAATAGGAACAAAGATATGCTTATACAAATATGGGTGCCGGTTAATAGAGGGGATGATAGGCCAATTCTGAGAGCTAATGATCTTCCTTTTTCACTTGAATCAAGGTCTTTAAACCTTGCAAAGTACCGAGAAATCTCTGTGAGATATCAGTTTTCTGCAGAGGTGGAGGACTCAAAGGAGTTGGTGGCAGGTTTGCCTGGTCGAGTTTATAGGGATAAGATTCCTGAGTGGACACCTGATGTTCGATTCTTCAGGAGTGATGAGTATCCGCGAGTTGACCATGCTCAAGAGTGTGATGTACACGGAACATTAGCGGTTCCGGTGTTTGAACAAGGGAGCAGGACATGTTTGGGAGTTATTGAAGTGGTGATGACGACACAGCAGAGCAACTATGGCCGTGAACTTGAGACTGTTTGCAAAGCGCTAGAGGTTGTTGATCTCAGCAGCTCTGGACATTCAAGTCTTCAGAATGTGAAGGCATGCAACAAGTCCTATGAAACCGCACTACCCGAGATTCAAGAGGTTTTGAGATCTGCATGTGAAATGCACAAATTACCTTTAGCTCAGACGTGGGTCTCTTGCATCCAACAGGGAAAAGATGGCTGCCGGCACTCTGATGATAATTACACACACTGTATATCTCCGGTGGAGTATGCTTGCTATGTTGGTGATTCCTCGGTCAGGTTTTTTCATGAGGCTTGCATGGAGCATCACTTGTTAATAGGTCAAGGTGTTGCCGGGGGTGCTTTTATGACAAATCAACCATGCTTCTCAACCGACATAACTTCTTTAAGCAAAACAGACTATCCACTGTCTCATCATGCCAGGTTGTTTGGATTGCGTGCTGCAGTTGCCATTCGACTCCGAAGCATCTATAGTATCTCAGACGACTATGTTCTTGAGTTTTTCTTGCCTGTAGATTGCAATGACAGTGAAGAACAGAAAAAGATGCTCACATCATTGTCCATGATTATTCAAAGGGTTTGCCGCAGCTTGCGAGTTATAACAAATAAGGAATTGGAGAAAAATAACTTATCATCTAATGAAGTGATGGCCGTTGCTGATATTGGATTTGCTACAGATGCAATTCAGTTGGAACTCCAACACAAGAGGATGGCTGTCTCGTTGGATGGCGAAGAAAAGTTTAATGAAACAATGTCTAGAAAGTTCTCGAAACAAAGGCGGCAACAAGAAAGTCTTACTTTAAGAGGAGATGTTGACTGTGGTAGGGAGTTTTCTCCTTCTGTTGAGGGTAACTTCTTGTCAAGTTTGGGAGTAAATAGAACAGGAGAGAAAAGACGGGCCAAGGCAGAGAAAACTATCACTCTTCAAGTCCTTAGACAATATTTCGCTGGAAGTCTAAAAGATGCTGCAAAGAATATTGGCGTCTGTACTACAACTCTGAAAAGGATCTGCAGGCAACATGGTATAAAGCGTTGGCCTTCTCGGAAGATAAAAAAGGTTGGTCATTCCTTGCAGAAACTTCAACTTGTCATTGACTCGGTTCAAGGTGCCTCTGGGTCATTTCAAATTGATTCATTCTATTCAAAATTCTCGGATCTATCGTCTCCAAATTTATCAGGAACCACCCTAATCTCAACTCTGAATCAAGTTGATAATCCAGTTTCATTAAGCATACAGCCAGATCCCGACTCGTTGAGCCCAGAAGGTGCATCAAAATCACCCTCCTCTTCATGTAGTCAGAGTTCCTATTCAAGCCATTCCTGTTCCAGCTTGTCAGAGCAACAACACCACACAAACAGTGTTGCGGCTGGTAACAAAGATTCATTGGTTGGTGAAGATTCTGTCGATGTTGTGTTGAAGAGAATCAGAAGTGAAGCAGAACTTAAAAGCCTGATTCAGGATAATAAATCAAAACTCATGCCAAGATCACAAAGCCAGGAAACGCTTGGTGAACACCCGAAAACCGAGTATCGCAAGTCCTTATTAAAAACCACTCGCAAAGCGTCTCAAAAGGAGGATGCTCATAGAGTAAAAGTTACATTTGGAGATGAGAAAACCCGGTTTAGGTTGCCAAAGAATTGGTGTTATGAAGATCTTGTGCAGGAAATTGCTAGGAGATTTAATGTAAGTGAAATGAGCAAATTCGATATCAAATATTTGGACGATGATTATGAATGGGTATTACTAACTTGTGATGCAGATTTAGAGGAGTGCATTGATGTTTCTCAATCTTCTGAGACTAGTACCATCAAACTTTGTCTGCAACCCTCCAGTAATTTTATCAGGAGTTCTTTAGAATTTAGATAG 2724 0.4258 MGDGAAVTSSATMMEAPPQDQNSMDFDYMSELLLDGCWLEASADGSEFLLQSSPFSNPIFDPSFSWPALENNEQSGNDVQHESQDAPLGTEQESWIIVNNAGSSDLQQCEFKTHLGEGVSRLWIPPTPNPGPGGSSITEKLIRALKWIKDFNRNKDMLIQIWVPVNRGDDRPILRANDLPFSLESRSLNLAKYREISVRYQFSAEVEDSKELVAGLPGRVYRDKIPEWTPDVRFFRSDEYPRVDHAQECDVHGTLAVPVFEQGSRTCLGVIEVVMTTQQSNYGRELETVCKALEVVDLSSSGHSSLQNVKACNKSYETALPEIQEVLRSACEMHKLPLAQTWVSCIQQGKDGCRHSDDNYTHCISPVEYACYVGDSSVRFFHEACMEHHLLIGQGVAGGAFMTNQPCFSTDITSLSKTDYPLSHHARLFGLRAAVAIRLRSIYSISDDYVLEFFLPVDCNDSEEQKKMLTSLSMIIQRVCRSLRVITNKELEKNNLSSNEVMAVADIGFATDAIQLELQHKRMAVSLDGEEKFNETMSRKFSKQRRQQESLTLRGDVDCGREFSPSVEGNFLSSLGVNRTGEKRRAKAEKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGSFQIDSFYSKFSDLSSPNLSGTTLISTLNQVDNPVSLSIQPDPDSLSPEGASKSPSSSCSQSSYSSHSCSSLSEQQHHTNSVAAGNKDSLVGEDSVDVVLKRIRSEAELKSLIQDNKSKLMPRSQSQETLGEHPKTEYRKSLLKTTRKASQKEDAHRVKVTFGDEKTRFRLPKNWCYEDLVQEIARRFNVSEMSKFDIKYLDDDYEWVLLTCDADLEECIDVSQSSETSTIKLCLQPSSNFIRSSLEFR 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07773 907 MobiDBLite consensus disorder prediction 1 20 - -
Mepo3g07773 907 MobiDBLite consensus disorder prediction 773 792 - -
Mepo3g07773 907 Pfam PB1 domain 814 895 IPR000270 GO:0005515
Mepo3g07773 907 SUPERFAMILY CAD & PB1 domains 807 898 - -
Mepo3g07773 907 PANTHER PROTEIN NLP8 79 896 IPR045012 GO:0003700
Mepo3g07773 907 MobiDBLite consensus disorder prediction 694 745 - -
Mepo3g07773 907 ProSiteProfiles RWP-RK domain profile. 578 659 IPR003035 -
Mepo3g07773 907 Pfam RWP-RK domain 591 639 IPR003035 -
Mepo3g07773 907 SMART PB1_new 813 896 IPR000270 GO:0005515
Mepo3g07773 907 CDD PB1_NLP 814 895 IPR034891 -
Mepo3g07773 907 ProSiteProfiles PB1 domain profile. 813 896 IPR000270 GO:0005515
Mepo3g07773 907 MobiDBLite consensus disorder prediction 694 744 - -
Mepo3g07773 907 Gene3D - 809 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07773 Mepo-Chr3 90917362 90922467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07773 24 898 NLP Transcription Factor Family AT1G20640 47.763 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mepo3g07773 PB1 2.3e-17 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07773 - - gmx:100790922 1268.45