Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07769 ATGGGAAACTGTTTGGCAAACTTAGGTGATGGCAAGAAGACTCAGAAAAAGACTACCTCTAGCTATAAACAACAGAACAATACTTCTCCTGCAGATTATGAGAGAAGTGTTGGAGCCAAAATCGCGGTAGCTGAGAAGGAAGAAAATAGGGAGAGCGCTAGAACAGTGGCAGGTGGTGGAAAAATAGTGAAGCCGAATCTAAAAATGTTCACATTGGATGAGTTGAAAAGTGCGACAAGAAACTTCAGACCAGACACAATACTTGGTGAGGGTGGTTTTGGTCGTGTTTTCAAAGGATGGATTGACAAAAACACTTTCAGACCATCCAAAGTTGGTGTTGGAATTCCTGTTGCTGTCAAAAAGTCCAGCGCCGATAGTCTCCAAGGTTTACAAGAATGGCAGAGTGAAGTAGACTTTTTGGGGAAGTTCTCTCATCCGAATCTTGTTAAACTACTTGGTTACTGTTGGGAGGAAAATCAATTCCTGCTGGTTTACGAGTACATGCAAAAGGGCAGCTTGGAAAGCCACCTCTTCAGAAGTCCTGAACCACTGTCTTGGGAAATAAGGTTGAAGATAGCCATAGGAGCTGCTAGAGGTTTAGGTTTCTTACACACTTCAGAAAAATCAGTTATATATAGAGACTTCAAGTCTTCAAACATTTTGCTTGATGGGGATTTCAATGCAAAGTTGTCTGACTTTGGATTGGCAAAGCTTGGGCCTGTCAACGGTAGATCACATGTAACCACCCGGATCATGGGTACCTATGGTTACGCAGCACCTGAGTACATGGCTACAGGTCATCTCTATGTGAAAAGCGATGTATACGGATTTGGTGTTGTTCTTCTAGAAATCTTAACAGGTTTAATAGCTTTGGACACAAATAGGCCAACGAATGAAATGAATTTGGTGGATTTTGCAAGGGGGTCTCTAAATGACAAAAAGAAACTAAAAAAGATAATGGATCAAAGGTTGGAAGAGCAATATTCATCAACAGCAGCATTTCTAGTAGCTCAACTCATACTCAAGTGTTTAGAATCTGACCCAAAAAATAGACCATCTATGGAACAAGTCTTGGAAACTTTAGAAAAGGCTCAATCCATTAAATATAAACCCAAAGTGAAAAAATCCAGAAATTCTATGCATCAAAAAAATAAGAGACCAAGGGAGCATTCTACCAATAATCATCACAATAATGGTCACTCCAAATCACAAACTCATTCCACTCAATAG 1230 0.4008 MGNCLANLGDGKKTQKKTTSSYKQQNNTSPADYERSVGAKIAVAEKEENRESARTVAGGGKIVKPNLKMFTLDELKSATRNFRPDTILGEGGFGRVFKGWIDKNTFRPSKVGVGIPVAVKKSSADSLQGLQEWQSEVDFLGKFSHPNLVKLLGYCWEENQFLLVYEYMQKGSLESHLFRSPEPLSWEIRLKIAIGAARGLGFLHTSEKSVIYRDFKSSNILLDGDFNAKLSDFGLAKLGPVNGRSHVTTRIMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEILTGLIALDTNRPTNEMNLVDFARGSLNDKKKLKKIMDQRLEEQYSSTAAFLVAQLILKCLESDPKNRPSMEQVLETLEKAQSIKYKPKVKKSRNSMHQKNKRPREHSTNNHHNNGHSKSQTHSTQ 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07769 409 Gene3D Transferase(Phosphotransferase) domain 1 168 390 - -
Mepo3g07769 409 MobiDBLite consensus disorder prediction 12 33 - -
Mepo3g07769 409 ProSiteProfiles Protein kinase domain profile. 82 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07769 409 MobiDBLite consensus disorder prediction 1 36 - -
Mepo3g07769 409 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 168 375 - -
Mepo3g07769 409 MobiDBLite consensus disorder prediction 370 384 - -
Mepo3g07769 409 FunFam Serine/threonine-protein kinase BIK1 34 167 - -
Mepo3g07769 409 MobiDBLite consensus disorder prediction 366 409 - -
Mepo3g07769 409 Pfam Protein tyrosine and serine/threonine kinase 86 361 IPR001245 GO:0004672|GO:0006468
Mepo3g07769 409 CDD STKc_IRAK 88 363 - -
Mepo3g07769 409 PANTHER OS01G0588500 PROTEIN-RELATED 28 365 - -
Mepo3g07769 409 Gene3D Phosphorylase Kinase; domain 1 66 167 - -
Mepo3g07769 409 SUPERFAMILY Protein kinase-like (PK-like) 67 385 IPR011009 -
Mepo3g07769 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Mepo3g07769 409 ProSitePatterns Protein kinases ATP-binding region signature. 88 121 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07769 Mepo-Chr3 90867594 90871231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07769 68 361 Glycoside Hydrolase AT3G07070 48.322 8.97e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo3g07769 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07769 - - aprc:113865973 587.03