Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07768 ATGAGTTGTTATTCTTGCTTTGTTTCTCGGAAAAAAGATGTTAGCAGAATTGAAGTTGATAATAGTTCTCGATCTGCTCACACTTCAGGGAATGGAGGAACAAGCACAACAGAGGGAAAGGGGAAGAGTGTAAGGACTGGTAAAAGCAGTACTGCAGCAGCTAGTTTTGGTTTTCGAGAGCTTGCAACCGCGACTAGGGGCTTTAAGGAAGCTAATTTGATTGGAGAAGGAGGTTTTGGAAAAGTATTTAAGGGTCGTCTTTCGACCGGAGAGCTTGTTGCTGTGAAACAATTAAGTCATGATGGTCGTCAAGGTTTTCAGGAATTTGTGACTGAGGTTCTTATGTTAAGTTTGCTACATCATTCTAATCTGGTTAAGTTAATTGGCTATTGCACTGATGGAGATCAAAGGCTTCTGGTTTATGAGTACATGCCTATGGGATCTCTCGAAGATCATCTTTTTGATCTTCCCCAAGATAAAGAACCTCTAAGCTGGAGTTCTCGGATGAAGATTGCTGTTGGAGCAGCTCGTGGCCTTGAGTATCTCCACTGTAAAGCAGATCCGCCTGTTATATATCGAGACTTAAAATCTGCAAACATCTTATTAGACAGCGACTTCAGCCCAAAACTGTCAGATTTTGGGCTTGCTAAGCTAGGACCTGTTGGAGACAACACCCATGTTTCAACGAGAGTGATGGGTACATATGGCTACTGTGCGCCAGAGTATGCGATGAGTGGCAAATTAACTCTTAAGTCTGATATCTACAGCTTTGGTGTGGTTTTGTTGGAGTTGATTACTGGACGAAGGGCAATAGATGCTAGTAAAAAACCAGGAGAGCAAAACTTAGTTTCATGGTCTCGCCCATATTTTAGTGACCGGAGAAAGTTTGTACATATGGCTGACCCTCTTTTGCAAGGACACTTCCCTGTCCGCTGTTTGCATCAAGCAATTGCTATAACTGCTATGTGTCTCCAAGAGCAGCCAAAATTCCGTCCACTCATTGGTGATATTGTCGTAGCACTGGAATACCTAGCTTCGCAGAGTCAGAATATCCCTGAAGTCCATAGACATGGTGTGCGTAGCCCACCGCAGCAACCACCTTCCAAAATGGACAGAAATTAA 1122 0.4332 MSCYSCFVSRKKDVSRIEVDNSSRSAHTSGNGGTSTTEGKGKSVRTGKSSTAAASFGFRELATATRGFKEANLIGEGGFGKVFKGRLSTGELVAVKQLSHDGRQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDLPQDKEPLSWSSRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDSDFSPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDASKKPGEQNLVSWSRPYFSDRRKFVHMADPLLQGHFPVRCLHQAIAITAMCLQEQPKFRPLIGDIVVALEYLASQSQNIPEVHRHGVRSPPQQPPSKMDRN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07768 373 ProSitePatterns Protein kinases ATP-binding region signature. 74 96 IPR017441 GO:0005524
Mepo3g07768 373 ProSiteProfiles Protein kinase domain profile. 68 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07768 373 SMART serkin_6 68 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07768 373 Gene3D Phosphorylase Kinase; domain 1 40 143 - -
Mepo3g07768 373 MobiDBLite consensus disorder prediction 352 373 - -
Mepo3g07768 373 PANTHER OS07G0668900 PROTEIN 33 352 - -
Mepo3g07768 373 Gene3D Transferase(Phosphotransferase) domain 1 144 359 - -
Mepo3g07768 373 MobiDBLite consensus disorder prediction 21 48 - -
Mepo3g07768 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Mepo3g07768 373 Pfam Protein kinase domain 69 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07768 373 MobiDBLite consensus disorder prediction 18 48 - -
Mepo3g07768 373 FunFam probable serine/threonine-protein kinase RLCKVII 40 143 - -
Mepo3g07768 373 FunFam Serine/threonine-protein kinase PBS1 144 358 - -
Mepo3g07768 373 SUPERFAMILY Protein kinase-like (PK-like) 50 342 IPR011009 -
Mepo3g07768 373 CDD STKc_IRAK 74 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07768 Mepo-Chr3 90846804 90850480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07768 1 346 Glycoside Hydrolase AT3G07070 58.939 2.99e-152 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mepo3g07768 Pkinase 8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07768 - - gmx:100796595 588.571