Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07765 ATGAAAGGAGCCAAGTCCAAGGGTGAATCCAAGAAAGCCGATGCTAAGCTTGCCGTGAATAAGAAGGGCGCCGCCACTACTAAGGGCGGAAGGAAACCAGCCAAGGGAAAGGAACCAAAGGACCCTAACAAGCCTAAGAGACCTCCAAGTGCTTTCTTCGTTTTCATGGAGGATTTTAGGAAGCAGTTCAAGAAGGATAACCCTGACAACAAAGCTGTGTCTGCTGTGGGCAAAGCTGCTGGAGCAAAATGGAAGTCATTGTCTGAAGCTGAGAAAGCACCATATGCAGCAAAAGCAGAGAAAAGGAAGGCAGAATATGAGAAAACCATGAAGGCATATAACAAAAAACAGGCTGAAGGTCCTGCTGCTGTTGAGGAAGAAGAATCTGGGAAATCAGAATCTGAAGTGCATGATGAGAATGAGGATGAAGATGAGGATGGCAGTGAAGAGGAGGAGGATGACGAGTAG 468 0.4679 MKGAKSKGESKKADAKLAVNKKGAATTKGGRKPAKGKEPKDPNKPKRPPSAFFVFMEDFRKQFKKDNPDNKAVSAVGKAAGAKWKSLSEAEKAPYAAKAEKRKAEYEKTMKAYNKKQAEGPAAVEEEESGKSESEVHDENEDEDEDGSEEEEDDE 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07765 155 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Mepo3g07765 155 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Mepo3g07765 155 MobiDBLite consensus disorder prediction 137 155 - -
Mepo3g07765 155 Gene3D High mobility group box domain 29 142 IPR036910 -
Mepo3g07765 155 CDD HMG-box_AtHMGB1-like 46 106 - -
Mepo3g07765 155 SMART hmgende2 44 115 IPR009071 -
Mepo3g07765 155 Coils Coil 96 116 - -
Mepo3g07765 155 SUPERFAMILY HMG-box 32 115 IPR036910 -
Mepo3g07765 155 MobiDBLite consensus disorder prediction 31 45 - -
Mepo3g07765 155 MobiDBLite consensus disorder prediction 64 155 - -
Mepo3g07765 155 MobiDBLite consensus disorder prediction 1 50 - -
Mepo3g07765 155 MobiDBLite consensus disorder prediction 1 18 - -
Mepo3g07765 155 MobiDBLite consensus disorder prediction 94 136 - -
Mepo3g07765 155 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 150 IPR031061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07765 Mepo-Chr3 90821676 90824063 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mepo3g07765 HMG_box 2.5e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07765 K25507 - lang:109352139 162.54