Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07756 ATGTATGATTTGGAAGAGATTGTTATGCATGTGGACATGGATTATTCTCCTCCAATTACAATATTAGAAGGCGATGATTACAACAAAGACAATGATAATGATAATGATGATGACAAATTAGGTGATTTCAATAATCTTAAACCAACCACAATTGGTAAACCTCCAAGGCATGCTTCCAGTTTGAGACATAGCCTTAGCTCCAATAGATTAAAACTGCCTGCATCAGATTTGAGTGTGGATGCAGAGGTTACTGGAAGTAAGTCATCTTCTGAAAACAAGACAGATTTTGTTCCGATATTTCGATCAGGAAGTTGTGCTGAAAGAGGACCTAAACAATATATGGAAGATGAACACGTGTGCATAGATGATCTTACTCAACACATAGGTTCTGCTTCAAATGTTCCTTTTCCTGGAGCTTTCTATGGGGTGTTTGATGGTCATGGAGGCACCGATGCTGCTTTGTTTGTAAGAAATAACATCCTTAGACTCATTGTTGAGGACTCTCAATTTCCAACTTGTGTGGAGAAGGCAATTACAAGTGCGTTTATGAAAGCTGATTATGCATTTGCAGATTCCAGTTCGCTTGATATATCCTCTGGCACCACTGCTTTAACTGCACTTGTATTTGGGAGGAACATGATAATTGCAAATGCGGGGGATTGTCGAGCTGTACTGGGGAGGCGAGGGAGAGCAATTGAGATGTCAAAAGACCAGAAACCAAATTGTATTTCAGAAAGACTAAGGATCGAAAAACTTGGTGGGGTGGTATATGATGGATACTTGAATGGCCAATTATCTGTTTCACGTGCCTTAGGAGACTGGCACATGAAGGGTCCCAAGGGTTCTGCCTGTCCTTTGAGTGCCGAGCCAGAGTTGCAGGAAATCTTATTGACTGAGGATGATGAATTCTTGATTATGGGCTGTGATGGCCTGTGGGATGTAATGAGTAACCAAGGTGCTGTGACAATGGCAAGAAAAGAGTTGATGATACATAATGATCCTCAAAGGTGTTCGAGAGAGTTGGTCAGAGAGGCTCTTAAGCGTAACTCGTGTGATAATTTAACGGTTATTGTGGTATGCTTCTCCCCAGATCCTCCTTCCAGGATAGAGATACCTCCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAAGCCTCACTTTACTTAAGGGTGTATTAGAGTGTTAG 1185 0.416 MYDLEEIVMHVDMDYSPPITILEGDDYNKDNDNDNDDDKLGDFNNLKPTTIGKPPRHASSLRHSLSSNRLKLPASDLSVDAEVTGSKSSSENKTDFVPIFRSGSCAERGPKQYMEDEHVCIDDLTQHIGSASNVPFPGAFYGVFDGHGGTDAALFVRNNILRLIVEDSQFPTCVEKAITSAFMKADYAFADSSSLDISSGTTALTALVFGRNMIIANAGDCRAVLGRRGRAIEMSKDQKPNCISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSAEPELQEILLTEDDEFLIMGCDGLWDVMSNQGAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVVCFSPDPPSRIEIPPSRVRRSISAESLTLLKGVLEC 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07756 394 Pfam Protein phosphatase 2C 102 353 IPR001932 -
Mepo3g07756 394 SMART PP2C_4 91 359 IPR001932 -
Mepo3g07756 394 CDD PP2Cc 100 361 IPR001932 -
Mepo3g07756 394 MobiDBLite consensus disorder prediction 22 65 - -
Mepo3g07756 394 ProSiteProfiles PPM-type phosphatase domain profile. 101 361 IPR001932 -
Mepo3g07756 394 SMART PP2C_SIG_2 116 361 IPR001932 -
Mepo3g07756 394 MobiDBLite consensus disorder prediction 25 43 - -
Mepo3g07756 394 FunFam Probable protein phosphatase 2C 22 86 364 - -
Mepo3g07756 394 PANTHER PROTEIN PHOSPHATASE 2C 86 359 IPR015655 GO:0004722|GO:0006470
Mepo3g07756 394 ProSitePatterns PPM-type phosphatase domain signature. 140 148 IPR000222 GO:0043169
Mepo3g07756 394 Gene3D - 78 364 IPR036457 -
Mepo3g07756 394 SUPERFAMILY PP2C-like 96 362 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07756 Mepo-Chr3 90751469 90754259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07756 11 393 PP2C-type Phosphatase Gene Family AT2G33700 71.244 0.0 555