Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07745 ATGACTCGTCCCTTCAGATTTCTCGGCGAGCTCAACTCGTCTTCCTCCGATTCACCTGACTCCTCCACCGTCGTTGATTCCGATTTTGTCGTCATCCTCGCTGCTCTTCTCTGTGCTCTCATCTGCGTTCTAGGTCTTGTTGCCGTCACCCGCTGCGGTTGTCTCCGCCGCTTACGTCTCTCCTCCACCACCAACGCTTCTCCAGCTGAACCTCCAGCTGCTGCCAACAAAGGCATCAAGAAGAAGGTTCTCCGTTCTCTCCCGAAGCTCACAGCAACAGAAGAATCCGCCGTGAAATTCTCCGATTGTGCTATCTGTTTAAGCGAATTCACCGCCGGAGATGAAATCCGAGTGTTGCCTCAGTGCGGCCATGGCTTCCATGTGTCTTGTATTGATTTATGGCTCAGATCTCATTCGTCATGTCCTTCCTGCCGTCAGATTCTGGTAGTTTCTAGATGCGATAAGTGCGGCGGGATTCCTCCTCCCGCCACAACTACGACGGCCGGATCCAGCTCTACGCCGGCACCGGTGCCGGATTGTGAAGCTAGATTAAAGGTAAGGGAGGATGATGAAAACAGATTCTTGCCATAG 591 0.5296 MTRPFRFLGELNSSSSDSPDSSTVVDSDFVVILAALLCALICVLGLVAVTRCGCLRRLRLSSTTNASPAEPPAAANKGIKKKVLRSLPKLTATEESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDLWLRSHSSCPSCRQILVVSRCDKCGGIPPPATTTTAGSSSTPAPVPDCEARLKVREDDENRFLP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07745 196 CDD RING-H2_EL5-like 102 145 - -
Mepo3g07745 196 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Mepo3g07745 196 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 149 IPR013083 -
Mepo3g07745 196 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 18 157 - -
Mepo3g07745 196 SMART ring_2 103 144 IPR001841 -
Mepo3g07745 196 Pfam Ring finger domain 102 145 IPR001841 -
Mepo3g07745 196 SUPERFAMILY RING/U-box 84 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07745 Mepo-Chr3 90676416 90677006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07745 5 196 C3H Transcription Factor Family AT1G20823 59.799 9.74e-70 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07745 - - pvu:PHAVU_009G007400g 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07745 3 90676416 90677006 Mepo3g07745 3 90676416 90677006 ECH