Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07741 ATGGAAGAAGTACTGTGTGAACTTAGTGATCATGAAAAGAAAAACGAGCAAGGTCTACCACCTGGTTTCAGGTTTCATCCAACTGATGAAGAACTCATTACCTTTTATTTGGCTTCTAAGGTTTTCAAAAATACTTATTTCAATAATGTCAAGTTTGCTGAAGTTGACCTCAATAGATGTGAGCCATGGGAACTTCCAGAAATGGCAAAGATGGGAGAAAGAGAGTGGTATCTGTTCAGCTTGAGAGACAGAAAATACCCAACTGGGCTTAGAACAAACAGAGCAACAAGTGCTGGTTATTGGAAAGCAACTGGGAAGGACAAGGAAGTTTACAGCTGCAGTAGTAGATCCCTTTTGGGGATGAAGAAGACCCTTGTTTTCTACAAAGGAAGGGCCCCTCGTGGTGAAAAGACCAAATGGGTCATGCATGAGTACCGTTTACACTCTCATCACTTTTCTCCTTCGAATACCACCTGCAAGGAAGAGTGGGTGATATGCAGGATATTTCATAAATCAGGGGAAAAGAGAAATTCACTACTCCAAATTCAAGGACATTTAGGTGGTAATCCTAATTTAACCCCCCAAAAAAGCTGTTTACCTCCTGCACCACCTTTACTTGCAACTTCATTTACACAACTAGACCAAAATGACCAATTACTCTCCCATTCTCATAATATTTTCCCATTGCCTACATTCCAACCTTCCTTCTCAATGATCAATCACACCACCAGAAACAACAATAATAATCCATCTTCAGAACTACTCTTCAAGTCACAACAAAATCAAACCATTCCAAAAACTGAAGCTACTTTCTATGATCAGCACCAATCACAATTAATAGATGATGCTCTTAACTTAAGATGGATTATTGACAATAATAATAATCAAAACTCCTTATTCCCTGTGGAGATGGATGCTGCTGCTCATGATCTGATTGCATTCTCAGGAGCTGCTACAAATGCTGAATTTAGGGACATGACAATTATTAACAGTAGAGGAGGAGTAGGCTTAGATGGTCCTATGGGAATAGATTCTTGGCCACATGCCCAACTTGTCTAA 1059 0.3966 MEEVLCELSDHEKKNEQGLPPGFRFHPTDEELITFYLASKVFKNTYFNNVKFAEVDLNRCEPWELPEMAKMGEREWYLFSLRDRKYPTGLRTNRATSAGYWKATGKDKEVYSCSSRSLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLHSHHFSPSNTTCKEEWVICRIFHKSGEKRNSLLQIQGHLGGNPNLTPQKSCLPPAPPLLATSFTQLDQNDQLLSHSHNIFPLPTFQPSFSMINHTTRNNNNNPSSELLFKSQQNQTIPKTEATFYDQHQSQLIDDALNLRWIIDNNNNQNSLFPVEMDAAAHDLIAFSGAATNAEFRDMTIINSRGGVGLDGPMGIDSWPHAQLV 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07741 352 Pfam No apical meristem (NAM) protein 20 147 IPR003441 GO:0003677|GO:0006355
Mepo3g07741 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 262 - -
Mepo3g07741 352 FunFam NAC domain-containing protein 100-like 28 175 - -
Mepo3g07741 352 Gene3D NAC domain 28 176 IPR036093 GO:0003677|GO:0006355
Mepo3g07741 352 ProSiteProfiles NAC domain profile. 19 171 IPR003441 GO:0003677|GO:0006355
Mepo3g07741 352 SUPERFAMILY NAC domain 14 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07741 Mepo-Chr3 90629555 90631093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07741 1 177 NAC Transcription Factor Family AT1G76420 73.446 2.09e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g07741 NAM 3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07741 - - gmx:100780313 387.882