Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07739 ATGTCAAGATCTGAATTAAGGAATGATGACCAACAACAACCAACCATCATCCCTGCCAGTATCGATAAGGGCGAATCGCCGGTGGCCGATATGTCATTTTCTCCAACCCCTCCCTTCGTGGACCAACAACAGCCGCCACTACCACAACCACCAACCATCACTGCTACCACCATCAATAGTGGTGAATCACATGTAGCAACGACGTTGACCGCTGTGCCATCTTCTTCAATCCCTCCCTTATCTTCTGTCTCAGCTGATACATCCAAAAAGCGTAGAGGCAGACCTATTGGTTCTCGCAACAAAATCCAGTCTAAAAAAAGGGCTTCTGGATCGGTGAGACCTGCAAAGGCCCACATTATGATGGTGAATGTCCAAGAGAATGTGTTAGAAAAGATTATGACATTCTCCCAGAATCTCTCTGAAAATATAAGCATATTATCGGCAGTTGGGACCACATCCAAAGCAACTATTTGTGTAGATCGTAAAATAGAGACTTACGAGGGAAAATTTGAGATTATATCTCTTGGTGGGTCTTTGTTTCCTGATAAGAAAGAAAGTCATTGCAAGATATTTGAAGGCTTAAATGTGAGTTTAACATCAGATGGTAGTGTATTTGGTGGTAAACTTGTTGATATTTTGATTGCTGCTTCTCCTGTTCAGATAGTATTAGGGAGTTATCCTGCAGGGAATCAAGAGGTAGTCAAGTCTGACCCAAAAGAGCCTCCTAAAGAAGACCCAAGTCCACCATCAGTTGAGAGTCAAGAGAAAGTCGAGTCTGACCCAAAAGAGCCTCCTAAAGAATACCCAAGTCCACCATCAGTTGAGAGTCACGAAAAAGTCGAGTCTGACCCAAAAGAGCCTTCTAAAGAAGACTCATGTCCACCATCAGAGATTACTCTTAACAATTCATCTTCAGATGGGCTTAATGTCCTAGTTTAA 939 0.4281 MSRSELRNDDQQQPTIIPASIDKGESPVADMSFSPTPPFVDQQQPPLPQPPTITATTINSGESHVATTLTAVPSSSIPPLSSVSADTSKKRRGRPIGSRNKIQSKKRASGSVRPAKAHIMMVNVQENVLEKIMTFSQNLSENISILSAVGTTSKATICVDRKIETYEGKFEIISLGGSLFPDKKESHCKIFEGLNVSLTSDGSVFGGKLVDILIAASPVQIVLGSYPAGNQEVVKSDPKEPPKEDPSPPSVESQEKVESDPKEPPKEYPSPPSVESHEKVESDPKEPSKEDSCPPSEITLNNSSSDGLNVLV 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07739 312 SUPERFAMILY AF0104/ALDC/Ptd012-like 115 228 - -
Mepo3g07739 312 ProSiteProfiles PPC domain profile profile. 112 248 IPR005175 -
Mepo3g07739 312 MobiDBLite consensus disorder prediction 71 86 - -
Mepo3g07739 312 MobiDBLite consensus disorder prediction 71 113 - -
Mepo3g07739 312 MobiDBLite consensus disorder prediction 272 292 - -
Mepo3g07739 312 MobiDBLite consensus disorder prediction 231 312 - -
Mepo3g07739 312 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 65 278 IPR039605 GO:0003680
Mepo3g07739 312 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 226 IPR005175 -
Mepo3g07739 312 Gene3D - 115 239 - -
Mepo3g07739 312 MobiDBLite consensus disorder prediction 294 312 - -
Mepo3g07739 312 MobiDBLite consensus disorder prediction 236 265 - -
Mepo3g07739 312 CDD DUF296 118 226 IPR005175 -
Mepo3g07739 312 MobiDBLite consensus disorder prediction 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07739 Mepo-Chr3 90618339 90620986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07739 82 232 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 41.401 5.95e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07739 - - mtr:120577018 412.92