Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07735 ATGGCATACCAGGGTCCAAGTTCAGGATCAAGTTCGAGTTCCGGGTTTCAATTGTTGAATTCTCCTTTTGGAGATACAACTTATACTAAAGTCTTCGTTGGTGGATTGGCATGGGAAACTCAGAGTGAAACTATGCGCCGTTACTTTGAACAATTTGGAGATATTCTTGAAGCCGTCGTCATCACCGATAAGAACACCGGACGATCCAAAGGCTACGGTTTTGTGACTTTCCGTGATCCAGAGGCTGCTAGGAGAGCCTGTGCTGATCCAAGTCCTGTTATTGATGGTAGAAGGGCTAATTGTAATTTGGCTTCGCATGGTCGTCCACGTGGACCCCCTATCACCTATGGACGGGTCAGACCAGCATCCCCTTATGTTGGAAGTTTGCAACCAGCCCGTGGTGCTTACGTTGGAGGTTATGGCTACCAACAACCACTTTCCTATGGCTACCAACAAGGAATGGTTTATCCTCCTTATGGGTATACGGCATATGGACCTGAATACGTATACCCACAGGGTATGTACAACCCTTATGCAGGTCAACAACAGTACCTTCAGATATACGGTGTGCCTGGTGCGATGAATACAACTATTTATCCTTATGGACAATTGGGTCAAGCTATTCCTGGCGGTCATGGTTATACAGCAATGCAGGGTTATACAGTACCAGGTCATCAGATTGTGCCCTATGGTGGGTCCAATGTTAATGCAATAACAACTTCACCTGTGCCTGCCATTCAAGTCCCATATCCTAGTGGAATTGCTGCACCAGTTCCAGGCCAACCACAATTTATTGTTTCTCCTCAGTTTATGCAAGGTAGCGGTCCTGACCAAACGGATGGTTGA 846 0.4657 MAYQGPSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASHGRPRGPPITYGRVRPASPYVGSLQPARGAYVGGYGYQQPLSYGYQQGMVYPPYGYTAYGPEYVYPQGMYNPYAGQQQYLQIYGVPGAMNTTIYPYGQLGQAIPGGHGYTAMQGYTVPGHQIVPYGGSNVNAITTSPVPAIQVPYPSGIAAPVPGQPQFIVSPQFMQGSGPDQTDG 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07735 281 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 29 106 IPR000504 GO:0003723
Mepo3g07735 281 CDD RRM_RBM24_RBM38_like 29 104 - -
Mepo3g07735 281 SMART rrm1_1 30 102 IPR000504 GO:0003723
Mepo3g07735 281 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 31 87 IPR000504 GO:0003723
Mepo3g07735 281 Gene3D - 5 113 IPR012677 -
Mepo3g07735 281 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 23 110 - -
Mepo3g07735 281 PANTHER BOULE-RELATED 7 245 - -
Mepo3g07735 281 SUPERFAMILY RNA-binding domain, RBD 28 142 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07735 Mepo-Chr3 90602003 90607195 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07735 1 166 C2H2 Transcription Factor Family AT2G19380 31.073 1.52e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07735 - - gmx:100782606 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07735 3 90602003 90607195 Mepo3g07735 3 90602003 90607195 ECH