Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07731 ATGGAGGGTCATGAAATGGATCTCGTTCAGAATGCTGCTGATCAAGAAATGCTTGATGCTGCTGCTGCTGATGATGACACAAAAGTCAATTCTACCCTCACTCCTCAACTTGAACAACAGCAGCCAAAACCTAAAGTTAAGAACGTTACAGAAATGAATAATAACAATGCTGGCGAGATAGCTGCTTATGATGAAGCCGGTACGCCTTTGGAGCGAGAAGCCTTTATGAAAGAGCTTGAGCATTTCTACAGATCGAGGTCCTTGGAATTTAAGCCTCCTAAGTTTTATCAAGTGCCATTGAATTGCCTCAAGTTATGGAGAGCTGTTATCAGACTAGGTGGCTACGAAGTGGTAACTGCATCGAAGTTGTGGCGGTCAGTAGGAGAGTCTTTCCACCCTCCCAAGACTTGCACTACAGTCTCATGGACGTTTAGAATCTTTTATGAGAAGGCACTTTTAGAGTATGAAAAGCATAAGAGAGAGATTGGGGAGCTACAGCTCCCTGTCGGATCACTCCATCAACCATCGAGTGTGGAAAAAGAGACCGCTGTTTATCAGGCTCCAGGCTCAGGTAGGGCGCGGAGGGATGCGGCAGCACGTGCAATGCAAGGTTGGCATGCTCAGCGCCTTATGGGATACGGCGAGGTTCCTGAGTCAGCTGTTAAGGACAAGAACTTCACTCCCACACCAAAACGTGAAAAGAACCTAAAAAATATCGGTGTGATCAACAAACAGAGAACACCATCTGGTATGGATGACAGAACTGCAAATATAGAAGGAGACAGGCAATTGGTCACAGCAGTAGTGGACATTGGACCCCCAGCTGATTGGGTGAAGATCAATGTGCGGGAAACGAAGGATTGTTTTGAAGTGTATGCTCTAGTTCCTGGGCTCCTTCGTGAAGAGGTACGGGTCCAATCCGATCCAGTTGGACGACTTGTTATAACTGGTATGCCAGAAAATGCTGACAATCCATGGGGTATCACCCCCTTCAAAAAGGTTGTGAACTTACCTGCGAGAATTGATCCGCTCCAGACATCTGCTGTTGTTAGTTTGCATGGTCGACTATTTGTGCGCGTTCCTTTCGAGCAAGGAGCTGTGTGA 1104 0.4674 MEGHEMDLVQNAADQEMLDAAAADDDTKVNSTLTPQLEQQQPKPKVKNVTEMNNNNAGEIAAYDEAGTPLEREAFMKELEHFYRSRSLEFKPPKFYQVPLNCLKLWRAVIRLGGYEVVTASKLWRSVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKREIGELQLPVGSLHQPSSVEKETAVYQAPGSGRARRDAAARAMQGWHAQRLMGYGEVPESAVKDKNFTPTPKREKNLKNIGVINKQRTPSGMDDRTANIEGDRQLVTAVVDIGPPADWVKINVRETKDCFEVYALVPGLLREEVRVQSDPVGRLVITGMPENADNPWGITPFKKVVNLPARIDPLQTSAVVSLHGRLFVRVPFEQGAV 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07731 367 ProSiteProfiles ARID domain profile. 69 160 IPR001606 GO:0003677
Mepo3g07731 367 Gene3D - 263 366 IPR008978 -
Mepo3g07731 367 FunFam AT-rich interactive domain-containing protein 3 69 168 - -
Mepo3g07731 367 SMART ARID_2 66 156 - -
Mepo3g07731 367 SUPERFAMILY HSP20-like chaperones 275 362 IPR008978 -
Mepo3g07731 367 MobiDBLite consensus disorder prediction 1 46 - -
Mepo3g07731 367 Gene3D - 70 167 IPR036431 GO:0003677
Mepo3g07731 367 CDD ARID 71 156 - -
Mepo3g07731 367 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 266 367 IPR002068 -
Mepo3g07731 367 Pfam ARID/BRIGHT DNA binding domain 71 156 IPR001606 GO:0003677
Mepo3g07731 367 MobiDBLite consensus disorder prediction 27 46 - -
Mepo3g07731 367 SMART bright_3 70 161 IPR001606 GO:0003677
Mepo3g07731 367 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 24 364 IPR045147 GO:0006357
Mepo3g07731 367 Pfam Hsp20/alpha crystallin family 282 363 IPR002068 -
Mepo3g07731 367 SUPERFAMILY ARID-like 63 166 IPR036431 GO:0003677
Mepo3g07731 367 CDD ACD_sHsps_p23-like 282 361 - -
Mepo3g07731 367 FunFam AT-rich interactive domain-containing protein 3 258 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07731 Mepo-Chr3 90586980 90592864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07731 59 364 ARID Transcription Factor Family AT1G76510 73.616 1.93e-153 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mepo3g07731 ARID 5.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07731 - - psat:127088333 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07731 3 90586980 90592864 Mepo3g07731 3 90586980 90592864 ECH