Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07711 ATGGTGGGGAGGGAAGTTTGTTACTGGGAGGAGAGAAAGGATGAGGTAGAGAGAGAAAGTGATGGAGATATGGTGTTGAGAGTCTATTGTGCAAATCAGTATATGTACAACAATGGTGAGCATGTGCTTAATATTCCGCCACCAGGTCAAGGTGGAGGTTGGGGTGCAACACCTCCAAAAAAGACACCTCCAAAAACGACACCTTCAAAAAAGACACCTCCGCACCAGGTTAGTAGCAGTGAGTTGACCAACTCCAGTTACTCTGGCCCAGTAGATCCTGTATTGCCACCACCACACCCAACGGTTGCACTTGGGTTCAACCAGAGCTCATTCAGTTATGAAGAGTTATCAACTGCCACTGGTGGGTTTTCAAAACAAAACTTGTTGGGTCAAGGTGGATTTGGATATGTACATAAAGGTATTCTCCCTAATGGTAAGGAAATAGCAGTGAAGAGCCTTAAATCAACTGGTGGACAAGGTGACAGAGAATTTCAAGCTGAGGTTGATACTATCAGCCGTGTACATCATCGCTATCTTGTCTCGCTTGTTGGCTATTGCATTTCTGAATCTAAAAAGCTTCTCGTTTATGAATTTGTTCCCAACAAGACCCTTGATTATCACCTTCATGGAAAGGGTCGACCTGTGATGGATTGGGCCACAAGGCTTAAAATTGCGGTTGGATCCGCCAAAGGGCTTGCTTATTTACACGAGGACTGTCACCCTAGAATCATTCACCGAGACATCAAAGGTGCAAACATTCTAATTGAAAACAACTATGAAGCCAAAGTGGCAGATTTTGGATTGGCAAAATTTACTCAAGACACTAACACTCATGTTTCTACTCGTGTGATGGGAACATTTGGGTATATGGCTCCTGAGTATGCATCAAGTGGTAAGCTAACTGATAAATCTGATGTCTTCTCGTATGGTGTTGTGCTTCTGGAGCTCATAACAGGACGACGACCAGTCGGTACGGCCAGTGATTACGAGGAAGATAGTTTGGTTGATTGGGCTAGACCACTTTGTTCAAAAGCACTGGAAGATGGAATATTTCTTGGATTGGTGGATCCACGTTTAGAGGAAAATTATGACAAACAAGAGATGACACGTATGGTAGCTTGTGCTTCTGCTTGTGTTAGGCACTCAGGAAGAAGGCGTCCAAGAATGAGCCAGATTGTACGGGTACTGGAAGGAGATGCTTCACTAGAACTGCTTATAAACCAGGATGGAGTGAAACCTGGACAGAGTGCTATGTACAGTAGCGCAAGTGGAGATTATGATGCAGGGACATACAGTGCTGACATGAAAAAGTTCAGGAAACTAGCATTGGAAAGTGGCACAGGGAGCAGCGAGTACGGTGCAACTAGTGAGTATGGACTCAACCTTTCCGCCTCGAGCAGTGATCAATCTTCTGCTGATTATACGAGGAGGACGGTAACTAGAACTGGAGGCGGATCAAGATTCCATGAAAAATAA 1476 0.4458 MVGREVCYWEERKDEVERESDGDMVLRVYCANQYMYNNGEHVLNIPPPGQGGGWGATPPKKTPPKTTPSKKTPPHQVSSSELTNSSYSGPVDPVLPPPHPTVALGFNQSSFSYEELSTATGGFSKQNLLGQGGFGYVHKGILPNGKEIAVKSLKSTGGQGDREFQAEVDTISRVHHRYLVSLVGYCISESKKLLVYEFVPNKTLDYHLHGKGRPVMDWATRLKIAVGSAKGLAYLHEDCHPRIIHRDIKGANILIENNYEAKVADFGLAKFTQDTNTHVSTRVMGTFGYMAPEYASSGKLTDKSDVFSYGVVLLELITGRRPVGTASDYEEDSLVDWARPLCSKALEDGIFLGLVDPRLEENYDKQEMTRMVACASACVRHSGRRRPRMSQIVRVLEGDASLELLINQDGVKPGQSAMYSSASGDYDAGTYSADMKKFRKLALESGTGSSEYGATSEYGLNLSASSSDQSSADYTRRTVTRTGGGSRFHEK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07711 491 MobiDBLite consensus disorder prediction 461 491 - -
Mepo3g07711 491 Gene3D Transferase(Phosphotransferase) domain 1 199 408 - -
Mepo3g07711 491 FunFam proline-rich receptor-like protein kinase PERK1 101 198 - -
Mepo3g07711 491 SUPERFAMILY Protein kinase-like (PK-like) 103 396 IPR011009 -
Mepo3g07711 491 Coils Coil 489 491 - -
Mepo3g07711 491 MobiDBLite consensus disorder prediction 461 482 - -
Mepo3g07711 491 Pfam Protein tyrosine and serine/threonine kinase 126 395 IPR001245 GO:0004672|GO:0006468
Mepo3g07711 491 Gene3D Phosphorylase Kinase; domain 1 100 198 - -
Mepo3g07711 491 FunFam Proline-rich receptor-like protein kinase PERK1 199 407 - -
Mepo3g07711 491 SMART serkin_6 123 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07711 491 ProSiteProfiles Protein kinase domain profile. 123 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07711 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Mepo3g07711 491 MobiDBLite consensus disorder prediction 42 91 - -
Mepo3g07711 491 ProSitePatterns Protein kinases ATP-binding region signature. 129 151 IPR017441 GO:0005524
Mepo3g07711 491 MobiDBLite consensus disorder prediction 71 90 - -
Mepo3g07711 491 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 73 447 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07711 Mepo-Chr3 90424944 90427632 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07711 101 476 Trihelix Transcription Factor Family AT1G70460 59.043 5.57e-155 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mepo3g07711 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07711 - - mtr:11428117 841.262