Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07699 ATGTCTTCATTAGGGGTGCAACTCAGCATTCAAGATCATCATGTGGTGATGGACAATGGCATACTAAGAGTCACTTTATCAAATCCTGAGGGAATTGTCACTGGAATACAGTATAATGACACTGACAACTTGCTTGAAGTGTTGAATGAAGAATCTAATAGAGGGTATTGGGACCTCGTTTGGAGCTCACCAACAAGTACAGGAACCACCGGAAAATTTGATGTGATAAAGGCAACCACATTCAAAGTTATATTGGAAGATGAGGATCAAGTTGAGTTATCCTTCTTCAGGACTTGGGATGCTTCCCTAGAGGGCAAGTTGGTTCCTTTAAATATTGATAAAAGGTCTGTGACAATAAAATATATCTAG 369 0.393 MSSLGVQLSIQDHHVVMDNGILRVTLSNPEGIVTGIQYNDTDNLLEVLNEESNRGYWDLVWSSPTSTGTTGKFDVIKATTFKVILEDEDQVELSFFRTWDASLEGKLVPLNIDKRSVTIKYI 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07699 122 Pfam Rhamnogalacturonate lyase family 4 118 IPR010325 -
Mepo3g07699 122 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 11 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07699 Mepo-Chr3 90338159 90339483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07699 1 120 Polysaccharide Lyase AT1G09910 63.333 5.13e-49 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07699 K18195 - gmx:100793563 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07699 3 90338159 90339483 Mepo3g07699 3 90338159 90339483 ECH