Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07691 ATGGAGTTCTATGAAGGAGATTTCATGGAGGAATTAATGGCTCTAAGAAGAGAAACATATGAAATTACCAATCCATGTCAAGAAGAAAATCAATTCTTCTCATCAACAAGTAACTTGAGTTTTGATAACTGTTTTGATCAAAACTCTATACCATATCTACCAAACTCTTCTTGTAGTCAACAAGTTCCTCAAAGCTATAACAACAATGATCACTACAGTACCACTTTCAATGAAATCTATGGTTCCTTGCTTGATGAATCTTCAACACCACAGATTCTTGGTTCATACTATAATAATAGTATTGACACTCCATTTATTTCTCAAGAAGACTTTCCACTGTCCATGATGGGAGAAGAAGATCAAAGTTTGCTTGATGAAGAGCTTCAGAATTTGGAGCTGCAAACAACATGTAAAATGGAGCCAATACAATCACCTGAAATGCCAGTAGTTTTCAACACTGGTAATGGTATGGAAAGAAAGAACCGGTCGAAGAAACTTCAAGGACAACCGTCGAAGAATCTAATGGCTGAAAGGAGAAGACGAAAGAGATTAAACGATCGTCTTTCAATGCTACGAGCAATTGTCCCGAAGATAAGCAAGATGGACAGAACAGCTATACTTGGAGATACTATTGATTACATGAAAGAGCTCCTAGAGAAAATCAACAATCTGCAACAAGAAATTGAACTAGATTCAAATATGACAAGCATTGTCAAAGATATCAAACCAAATGAAATCTTAATCAGAAATTCTCCCAAGTTTGAGGTGGAGAGGAGTGCAGACACAAGGGTTGAAATTTGTTGTGCAGGGAAGCCAGGGTTGTTGCTATCCACAGTAAACACATTGGAAGCATTAGGCCTTGAGATTCAACAATGTGTTATTAGCTGCTTCAATGATTTCACAATGCAGGCTTCTTGCTCAGAGGAATTGGAGAAAAGGGCTATGCTAAGTTCTGAAGATATTAAACAAACCTTATTCAGAAGTGCAGGGTATGGTGGAAGATGTTTGTGA 1011 0.3739 MEFYEGDFMEELMALRRETYEITNPCQEENQFFSSTSNLSFDNCFDQNSIPYLPNSSCSQQVPQSYNNNDHYSTTFNEIYGSLLDESSTPQILGSYYNNSIDTPFISQEDFPLSMMGEEDQSLLDEELQNLELQTTCKMEPIQSPEMPVVFNTGNGMERKNRSKKLQGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTAILGDTIDYMKELLEKINNLQQEIELDSNMTSIVKDIKPNEILIRNSPKFEVERSADTRVEICCAGKPGLLLSTVNTLEALGLEIQQCVISCFNDFTMQASCSEELEKRAMLSSEDIKQTLFRSAGYGGRCL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07691 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 217 IPR011598 GO:0046983
Mepo3g07691 336 Coils Coil 207 234 - -
Mepo3g07691 336 MobiDBLite consensus disorder prediction 154 180 - -
Mepo3g07691 336 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 52 330 - -
Mepo3g07691 336 Pfam Helix-loop-helix DNA-binding domain 174 217 IPR011598 GO:0046983
Mepo3g07691 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 172 230 IPR036638 GO:0046983
Mepo3g07691 336 SMART finulus 174 223 IPR011598 GO:0046983
Mepo3g07691 336 CDD ACT_UUR-ACR-like 262 303 - -
Mepo3g07691 336 Gene3D - 156 233 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07691 Mepo-Chr3 90257575 90259680 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07691 159 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 67.222 2.18e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo3g07691 HLH 2.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07691 - - cam:101489960 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07691 3 90257575 90259680 Mepo3g07691 3 90257575 90259680 ECH