Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07678 ATGTTTTCCTCGCGAGTTTTCTCTCTTCTCCTTCTTGTGTTCTCATTACTCACAATTACCAAATCAAACGAGCTTGAAATTCTACTAAACCTTAAAACTTCCCTTGAAAATTCAAACACCAAAGATTTCTTCAACTCATGGAATGCTAACAGTTCCATTTGCAGTTTCCATGGAATCACCTGCAATTCCATCAACTCTGTCACAGAAATTAACCTTTCTAATAAAAACCTCTCAGGAATTCTCCCAATAGACTCACTCTGCAACCTTCAATCGCTCACAAAACTCGTCTTAGGTTTCAACCATTTCCATGGCAGAGTCAATGAAAGCCTTAGAAACTGTGTCAAGTTACAGTTCTTGGATTTAGGAAACAATATTTTCTCAGGACCTTTCCCAGATATTTCACCTCTTCATGAACTTCAATACCTTTACGTAAACCAAAGTAGATTTTCTGGAACTTTTCCATGGCAATCTCTGTTGAATATGACGGATTTGTTACAGTTAAGCGTTGGAGACAATCCTTTCGATCTAACGCCGTTTCCTGAAGAGATTTTAAGTCTCAAGAAGCTGAATTGGCTTTACATGAGTAACTGCAACCTTGGAGGGAAATTACCGGTTGGAATCGGTAACTTAACAGAGTTAACAGAGTTAGAATTCGCCGATAATTCCATTACCGGAGAATTTCCCGGTGAGATTGTCAACCTTCACAAACTCTGGCAGCTTGAATTCTACAACAATTCCTTTACCGGGAAGATTCCGATCGGGTTGAGAAATCTCACAGGACTCAAGTATTTGGACGGATCAATGAATCAATTAGAAGGAAATCTCTCTGAGATAAGGTTTTTAAGCAATCTAGTTTCACTTCAGTTCTTCGAAAACAAATTGTCAGGCGAGATTCCACCGGAGATAGGCGAGTTTAAAAACCTCAAGGAACTTTCTTTTTACAGAAACAGATTAACAGGTCCAATTCCTCAGAAGACTGGATCATGGTCAGAATTTGAATACATCGACCTTTCGGAGAATTTCTTAACAGGTTCAATTCCACCAAACATGTGCAACAAAGGAAAAATGTACGCACTTCTTGTTCTTCAGAACAATCTCACAGGTGAGATACCGGAAAGCTACAGCACCTGTTTGAGTTTAGAACGACTCAGAGTGAGTAGAAACTCGCTCTCAGGTACCGTTCCTTCTGGTATCTGGGGATTACCCAATGTTACAGTAATTGATATTGAATTGAATCAGTTAGAAGGTTCTATTAGTTCAGAGATTCAAAAAGCGAATAAACTTGCTAGTATACTCGCAAGGAGTAACCGGTTAACCGGCGTGATACCAGAAGAGATTTCAAAAACAACGTCGTTGGTGACAATTGATCTAAGCGACAATCAAATTTCTGGGAACATTCCAGAAGGAATTGGTGAACTTAAACAACTTGGTAACCTGCATTTGCAGGGTAACAAGTTAACAGGGGTAATTCCATTGTCTTTGGGTTACTGTAACAAACTCAACGACGTTGATCTTTCGAGAAATGAACTCTCGAAAGATATTCCTTCGTCGTTGGGTTTGTTACCGGCTTTAAATTCTCTGAATTTCTCGGAGAATGAACTTTCTGGTAAAATACCAGAGAGTTTAGGTTCATTGAAGTTGAGTCTCTTTGATCTTTCGCATAACCGATTATCCGGTGAAATTCCAATGGGTTTGACTATTCAAGCTTACAATGGAAGCCTCACCGGAAACCCGGGTTTATGCACGCTTGATGCTATTGGTTCCTTCAAGCGTTGTTCTGAGAATAGTGGCTTGTCAAAAGATGTCCGTGCCCTTGTTCTTTGTTTCACTATAATTTTGGTTTTGGTCCTTTCTTTTATGGGTGTTTACTTGAAGTTGAAGAAAAATGGGAAGGTAGAAAAGGGAGAGGGTAATAAATATGGAAGAGAACGTTCCTTGAAGGAAGAATCATGGGATGTGAAATCTTTCCACGTGCTAAGTTTCACAGAAGATGAGATTCTTGATTCTGTTAAGCAAGAGAATATAATAGGAACAGGAGGTTCAGGGAATGTTTATAGAGTCACGCTTGCAAATGGAAAAGAACTTGCTGTTAAGCATATTTGGAACACCGATTTCGGGTCCCGGAAAAAGTCATGGAGCAGCACACCGATGCTCGCGAAGCGCGTTGGTAGTGGTGGTTCAAGGTCGAAGGAATTCGATGCGGAGGTTCAGGCGTTGAGTTCAATAAGACATGTGAATGTGGTGAAGCTTTATTGTAGTATAACGAGTGAGGATTCGAGTCTTTTGGTTTATGAGTATTTGCCTAATGGAAGTTTGTGGGATAGGCTTCATAGTAGTGGCAAGATGGAGCTTGATTGGGAAACAAGGTATGAAATTGCCGTTGGTGCTGCAAAAGGGTTAGAGTATTTGCATCATGGGTGTGAAAGACCTGTGATTCATAGGGATGTTAAATCTAGTAACATTTTGTTAGATGAGTTCTTGAAACCTAGGATTGCTGATTTTGGTCTCGCTAAGATTGTTCATGCCAATGTTGTTAAGGATTCTACTCATATCATCGCAGGAACTCATGGCTACATCGCTCCCGAATATGGGTACACATATAGAGTGAATGAGAAAAGTGATGTGTATAGTTTTGGAGTGGTGTTGATGGAGCTTGTAACTGGTAAAAGGCCAAGTGAAGCTGAATTTGGAGAAAACAAAGACATAGTAAGTTGGGTTCATGGGAAGACAAGGAGCAAGGAGAAGTTCATGAGTGTGGTGGATTCGAGAATTCCGGAGATGTATAAAGAGGAAGCTTGTAAGGTATTGAGAACTGCAGTTCTTTGTACTGCAACTCTTCCTGCTATGAGACCAAGTATGAGAGCTGTGCTTCAAAAACTTGAGGATGCTGCTCCTTGTAAATTGGTTGGAATTGTTATTAGCAAAGATGGGAGTGGAAAGAAAATTGAGGTCAATGACAAATGA 2964 0.4011 MFSSRVFSLLLLVFSLLTITKSNELEILLNLKTSLENSNTKDFFNSWNANSSICSFHGITCNSINSVTEINLSNKNLSGILPIDSLCNLQSLTKLVLGFNHFHGRVNESLRNCVKLQFLDLGNNIFSGPFPDISPLHELQYLYVNQSRFSGTFPWQSLLNMTDLLQLSVGDNPFDLTPFPEEILSLKKLNWLYMSNCNLGGKLPVGIGNLTELTELEFADNSITGEFPGEIVNLHKLWQLEFYNNSFTGKIPIGLRNLTGLKYLDGSMNQLEGNLSEIRFLSNLVSLQFFENKLSGEIPPEIGEFKNLKELSFYRNRLTGPIPQKTGSWSEFEYIDLSENFLTGSIPPNMCNKGKMYALLVLQNNLTGEIPESYSTCLSLERLRVSRNSLSGTVPSGIWGLPNVTVIDIELNQLEGSISSEIQKANKLASILARSNRLTGVIPEEISKTTSLVTIDLSDNQISGNIPEGIGELKQLGNLHLQGNKLTGVIPLSLGYCNKLNDVDLSRNELSKDIPSSLGLLPALNSLNFSENELSGKIPESLGSLKLSLFDLSHNRLSGEIPMGLTIQAYNGSLTGNPGLCTLDAIGSFKRCSENSGLSKDVRALVLCFTIILVLVLSFMGVYLKLKKNGKVEKGEGNKYGRERSLKEESWDVKSFHVLSFTEDEILDSVKQENIIGTGGSGNVYRVTLANGKELAVKHIWNTDFGSRKKSWSSTPMLAKRVGSGGSRSKEFDAEVQALSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHSSGKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVHANVVKDSTHIIAGTHGYIAPEYGYTYRVNEKSDVYSFGVVLMELVTGKRPSEAEFGENKDIVSWVHGKTRSKEKFMSVVDSRIPEMYKEEACKVLRTAVLCTATLPAMRPSMRAVLQKLEDAAPCKLVGIVISKDGSGKKIEVNDK 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07678 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Mepo3g07678 987 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 14 959 - -
Mepo3g07678 987 SMART LRR_sd22_2 210 236 - -
Mepo3g07678 987 SMART LRR_sd22_2 305 337 - -
Mepo3g07678 987 SMART LRR_sd22_2 449 468 - -
Mepo3g07678 987 SMART LRR_sd22_2 473 494 - -
Mepo3g07678 987 SUPERFAMILY L domain-like 270 590 - -
Mepo3g07678 987 FunFam Receptor-like protein kinase 7 106 355 - -
Mepo3g07678 987 SUPERFAMILY L domain-like 30 324 - -
Mepo3g07678 987 Gene3D Phosphorylase Kinase; domain 1 653 766 - -
Mepo3g07678 987 ProSiteProfiles Protein kinase domain profile. 670 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07678 987 Gene3D Ribonuclease Inhibitor 280 353 IPR032675 -
Mepo3g07678 987 FunFam Receptor-like protein kinase HAIKU2 653 766 - -
Mepo3g07678 987 Gene3D Ribonuclease Inhibitor 177 279 IPR032675 -
Mepo3g07678 987 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Mepo3g07678 987 SUPERFAMILY Protein kinase-like (PK-like) 662 960 IPR011009 -
Mepo3g07678 987 Gene3D Transferase(Phosphotransferase) domain 1 767 968 - -
Mepo3g07678 987 Gene3D Ribonuclease Inhibitor 23 176 IPR032675 -
Mepo3g07678 987 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 767 975 - -
Mepo3g07678 987 Pfam Protein kinase domain 671 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07678 987 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 356 596 - -
Mepo3g07678 987 Gene3D Ribonuclease Inhibitor 355 598 IPR032675 -
Mepo3g07678 987 SMART serkin_6 670 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07678 987 ProSitePatterns Protein kinases ATP-binding region signature. 676 698 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07678 Mepo-Chr3 90074672 90078448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07678 11 985 Receptor kinase-like Gene Family AT1G09970 59.184 0.0 1132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g07678 Pkinase 5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07678 - - gmx:100779554 1504.96