Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07661 ATGGCTATCGCAACAGAGACTCAACCTCAGCCTCATCAACAAAACCATACGGCTTCTTCGGAGGTTTCAGGTTCAGCTAAGGATCAAAGAAGGTGGATTCTAAATGATTTTGATATTGGAAAACCTCTTGGTAGGGGCAAATTCGGCCATGTCTATTTGGCCAGAGAAAAAACTAGTAATCATATCGTTGCTTTGAAAGTACTCTTTAAGAGCCAATTGCAACAATCCCAAGTTGAGCATCAGCTTCGCAGAGAAGTTGAAATACAGAGTCATCTCAGACACCCTCACATCTTGCGCCTTTATGGATACTTTTATGATCAGAAACGAGTTTACTTGATTTTAGAGTATGCACCTAAAGGTGAACTTTACAAGGAATTACAGAAATGCAAATATTTCAGTGAAAGACGTGCAGCTACTTATGTTGCATCATTGGCTCGAGCCCTTATATATTGCCATGGAAAGCATGTCATACACAGGGACATTAAACCAGAGAACCTTCTTATTGGTGCACAGGGTGAACTTAAGATAGCAGACTTTGGGTGGTCAGTGCACACATTCAATCGCAGGCGGACCATGTGCGGCACACTGGATTACCTTCCACCTGAGATGGTGGAGAGTGTAGAACATGATGCGAGTGTGGATATATGGAGCCTTGGTGTCCTTTGCTATGAGTTTCTTTATGGAGTTCCCCCTTTTGAGGCTAAAGAACATTCTGATACTTACAGGAGGATAATTCAAGTGGATCTCAAGTTCCCTCCTAAACCAATTGTTTCTTCTGCTGCCAAAGACCTCATCAGTCAGGTTTTACATCTGTTCCATGCACTATGGATTTTTTTTTTTGTGAACTTCTCTAGAGAATTCTCTTTCACGGTTTATTTCATTAAAGCATTTTTCTCTGAGTGTTTTTTCCTTCTCATCTTTTAA 924 0.4091 MAIATETQPQPHQQNHTASSEVSGSAKDQRRWILNDFDIGKPLGRGKFGHVYLAREKTSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIIQVDLKFPPKPIVSSAAKDLISQVLHLFHALWIFFFVNFSREFSFTVYFIKAFFSECFFLLIF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07661 307 Pfam Protein kinase domain 39 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07661 307 SMART serkin_6 37 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07661 307 ProSiteProfiles Protein kinase domain profile. 37 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07661 307 Gene3D Phosphorylase Kinase; domain 1 24 119 - -
Mepo3g07661 307 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Mepo3g07661 307 MobiDBLite consensus disorder prediction 1 26 - -
Mepo3g07661 307 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Mepo3g07661 307 FunFam Aurora kinase A 29 120 - -
Mepo3g07661 307 CDD STKc_Aurora 36 269 - -
Mepo3g07661 307 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 7 270 IPR030616 GO:0004672
Mepo3g07661 307 FunFam Serine/threonine-protein kinase ark1 29 274 - -
Mepo3g07661 307 MobiDBLite consensus disorder prediction 1 27 - -
Mepo3g07661 307 SUPERFAMILY Protein kinase-like (PK-like) 16 286 IPR011009 -
Mepo3g07661 307 Gene3D Transferase(Phosphotransferase) domain 1 120 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07661 Mepo-Chr3 89880217 89883064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07661 31 269 AGC Kinase Gene Family AT1G48490 33.955 2.39e-48 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Mepo3g07661 Pkinase 7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07661 K08850 - gmx:100803678 522.702