Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07634 ATGATGGCAGTGAGTTCAGGGTGCAAAGATGGTAGCAAGATAGCAATGGACAATGGAAAGTATGTAAGGTACACACCAGAGCAAGTGGAAGCACTTGAAAGACTCTACCATGAATGTCCAAAACCAACTTCTCTTCGCAGACAACAACTCATTAGAGAGTGTCCTATTCTCTCTCATATTGAACCTAAACAAATCAAAGTTTGGTTCCAGAACAGAAGGTGCAGAGAGAAGCAGAGGAAAGAAGCTGGAAGGTTACAAGCTGTGAACAGGAAGTTAACAGCAATGAACAAACTGCTTATGGAGGAAAATGATAGATTGCAGAAACAAGTGTCACACCTTGTGTATGAGAACACGTTTTTCCGCCAACATACACAAAATACGACCGGCCTTGCCACTACGGACACGAGTTGTGAGTCAGTGGTAACAAGCGGTCAGCAGCATCCACCAAGGGATGCAAGTCCTGCTGGACTTTTGTCCATTGCAGAGGAGACTTTAGCAGACTTTCTATCAAAGGCCACTGGAACCGCTGTTGAGTGGGTCCAAATGCCCGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCAATTTCTCATGGTTCCCCTGGAGTGGCTGCACGTGCGTGCGGCCTCGTGGGTCTTGAACCTGCAAGGGTTGCTGAAATCCTCAAAGATAGGCTCTCATGGTATCGTGATTGCCGAACTGTGGATGTGCTAAATGTTATGTCCACAGGAAATGGAGGAACCATTGAATTGCTTTACATGCAGTTGTATGCGCCAACAACTCTGGCACCAGGTCGCGACTTCTGGTTGCTGCGCTACACATCACTTTTGGAGGATGGCAGTCTTGTGGTGTGTGAAAGATCACTTAACAACACACAGAATGGTCCTAGTATGCCTCCAGTGCCGCATTTTGTTAGAGCTGAAGTGTTGCCAAGCGGTTATCTGATTAGACCCTGTGAAGGAGGGGGATCCATAATTCATATTGTTGATCATATGCTTTTAGAGCCTTGGAGTGTACCTGAAGTTTTGCGCCCACTTTATGAGTCGTCCATGCTGCTTGCTCAGAGAACAACTATGGCAGCTCTACGTCATTTAAGGCAGATTTCTCAAGAAGTTTCTCAGCCAAGTGTGACAGGATGGGGAAGGCGGCCTGCAGCTCTACGTGCGCTTAGTCAAAGATTGAGCAAGGGATTCAATGAAGCTGTCAACGGGTTTACAGATGATGGATGGTCTATGTTAGAGAGTGATGGAATTGATGATGTCACCCTTCTTGTGAATTCATCACCTAGCAAGATGATGGGACTAAATCTTGGTTATAACAATGGATTTCCATCTGTCACCAGTTCTGTGCTATGTGCCAAAGCTTCCATGTTGTTACAGAATGTCCCTCCGGCTATTCTTCTTAGATTTTTGCGGGAACACCGATCAGAATGGGCAGATACAAGTATTGATGCTTATTCAGCAGCTGCCATTAAAGCTGGTCCATGTAGCTTGCCAGGGCCCCGAGCAGGAGCTTTTGGTGGTCAGGTTATTCTTCCACTAGCTCACACAATTGAGCATGAAGAGTTTATGGAGGTTATCAAGCTTGAAAACATGGGCTACTATAGGGATGATATGACAATGCCTGGTGATATTTTCCTCTTACAACTTTGTAGTGGAGTGGATGAGCATGCAGTTGGCACAAGTGCAGAGCTTATTTTTGCTCCAATTGATGCATCTTTCTCTGATGATGCGCCCATTTTGCCTTCTGGTTTTCGCATCATACCTCTTGAATCTGGCACGGATGCTGCTAGTCCTAACCGCACACTCGATCTTGCTTCTGCACTTGAGGTTGGAACCACTGGAAACAAAGCAGGGGGTGACAATTCAGGTCATTCGGGGAACACAAAATCTGTGATGACAATAGCGTTCCAGTTTGCATTTGAATCCCACCTTCAAGATAATATCGCAGCTATGGCACGACAGTATGTGCGTAGCATTGTTGCATCTGTTCAAAGAGTTTCATTAGCACTTTCACCTTCGCGTTTTGGTTCTCAAAATGCTTTTCACTTACCACCTGGAACTCCTGAGGCACAAACGCTTACTCGGTGGATCTGTAACAGCTATAGATTCTATCTAGGCGCAGAACTACTTAAGGGTGAAGGGAGTGAATCGATACTTAAATCCCTTTGGCATCACTCAGATGCGGTTCTGTGTTGCTCTTTAAAGGCATTACCCGTTTTTACGTTTGCGAATCAAGCTGGACTTGACATGCTTGAAACCACCCTGGTTGCACTTCAAGACATCACCCTAGAAAAGATATTCGATGACAATGGAAAGAAAACCCTGTACTCTGAATTCCCCCAGATAATGCAGCAGGGTTTCATGTGTATTCAAGGCGGTATTTGTTTATCCAGCATGGGGAGGCCAATAACTTATGAGAGAGCTGTAGCATGGAAAGTATTGAACGAAGAAGAATCTGCTCATTGCATCTGTTTCATGTTCATCAATTGGTCTTTTGTCTAA 2508 0.4533 MMAVSSGCKDGSKIAMDNGKYVRYTPEQVEALERLYHECPKPTSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKEAGRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENTFFRQHTQNTTGLATTDTSCESVVTSGQQHPPRDASPAGLLSIAEETLADFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGSPGVAARACGLVGLEPARVAEILKDRLSWYRDCRTVDVLNVMSTGNGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPSMPPVPHFVRAEVLPSGYLIRPCEGGGSIIHIVDHMLLEPWSVPEVLRPLYESSMLLAQRTTMAALRHLRQISQEVSQPSVTGWGRRPAALRALSQRLSKGFNEAVNGFTDDGWSMLESDGIDDVTLLVNSSPSKMMGLNLGYNNGFPSVTSSVLCAKASMLLQNVPPAILLRFLREHRSEWADTSIDAYSAAAIKAGPCSLPGPRAGAFGGQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTMPGDIFLLQLCSGVDEHAVGTSAELIFAPIDASFSDDAPILPSGFRIIPLESGTDAASPNRTLDLASALEVGTTGNKAGGDNSGHSGNTKSVMTIAFQFAFESHLQDNIAAMARQYVRSIVASVQRVSLALSPSRFGSQNAFHLPPGTPEAQTLTRWICNSYRFYLGAELLKGEGSESILKSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITLEKIFDDNGKKTLYSEFPQIMQQGFMCIQGGICLSSMGRPITYERAVAWKVLNEEESAHCICFMFINWSFV 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07634 835 Gene3D - 12 85 - -
Mepo3g07634 835 Pfam START domain 160 368 IPR002913 GO:0008289
Mepo3g07634 835 CDD bZIP 72 111 - -
Mepo3g07634 835 SUPERFAMILY Homeodomain-like 19 82 IPR009057 -
Mepo3g07634 835 Gene3D - 193 375 IPR023393 -
Mepo3g07634 835 Pfam MEKHLA domain 694 834 IPR013978 -
Mepo3g07634 835 SMART START_1 159 369 IPR002913 GO:0008289
Mepo3g07634 835 SMART HOX_1 17 83 IPR001356 GO:0003677
Mepo3g07634 835 SUPERFAMILY Bet v1-like 159 370 - -
Mepo3g07634 835 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 16 835 IPR044830 GO:0003700
Mepo3g07634 835 FunFam Homeobox-leucine zipper protein REVOLUTA 20 75 - -
Mepo3g07634 835 ProSiteProfiles START domain profile. 150 378 IPR002913 GO:0008289
Mepo3g07634 835 Coils Coil 85 109 - -
Mepo3g07634 835 CDD START_ArGLABRA2_like 154 369 - -
Mepo3g07634 835 Pfam Homeodomain 20 78 IPR001356 GO:0003677
Mepo3g07634 835 CDD homeodomain 20 80 IPR001356 GO:0003677
Mepo3g07634 835 ProSiteProfiles 'Homeobox' domain profile. 15 79 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07634 Mepo-Chr3 89631158 89636872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07634 16 835 Homeobox Transcription Factor Family AT4G32880 80.314 0.0 1390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo3g07634 START 5.7e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07634 K09338 - gmx:100815727 1576.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07634 3 89631158 89636872 Mepo3g07634 3 89631158 89636872 ECH