Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07616 ATGGTTGAAGAAAGTGACATCAGAAACTTCACTTTTTCATTCAGCTCAAGATTCTTACGAGTCCCTTCAAATTTAAGTGAAGACCCAAATCTTGAAATCTTTATTCAGAGGCAACCATCACAAAGAAAGAACAAAAAAGAAGAACAAGAACATGAACTTGTTCTTCTTGATCATGAAGAAGGTGGTAGCAGCAATGTTACAAAGTGGAAGCAAGAGCAACCTTTGCATATGATTAATCATAAAATATTAATCTCCGATGTTGTTACAAGGAGTAGGTGGAGTGATCTTAATTCTTCAGATTTGTTATCATTGAACAGTGAAATGCTTCATGATATGTCAAGCACGAGATTCTCTCCTGAATTTCATGGAATTTCAAGTGTTCATTCTGATGAGGAAGAAAATTCGTTTACGGCATTGAATCCTGGTGAGAAGAGGAGTATGTCTGAGATAGCAAATGTTCCAAGGTTTGTCGAAATCAGCAGAAGAAGTGGGGAGAATGGAAGTGATGAGAGGTTGTGGAGGATTTGGATGCCAATTGCAAGAAGAACAGTTCAATGGTTTGCAAGACAAGAAACAAACTCTGTTCAATTACAACAACATAAACATTTAGTTTCAAATGTTTGA 624 0.3638 MVEESDIRNFTFSFSSRFLRVPSNLSEDPNLEIFIQRQPSQRKNKKEEQEHELVLLDHEEGGSSNVTKWKQEQPLHMINHKILISDVVTRSRWSDLNSSDLLSLNSEMLHDMSSTRFSPEFHGISSVHSDEEENSFTALNPGEKRSMSEIANVPRFVEISRRSGENGSDERLWRIWMPIARRTVQWFARQETNSVQLQQHKHLVSNV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07616 207 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 45 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07616 Mepo-Chr3 89456029 89457369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07616 71 203 C3H Transcription Factor Family AT4G28890 32.967 8.27e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07616 K10664 - gmx:100816668 185.652